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  • Cimino JJ. The contribution of observational studies and clinical context information for guiding the integration of infobuttons into clinical information systems. AMIA Annu Symp Proc. 2009 Nov 14;2009:109-13.
  • Homer ML, Palmer NP, Bodenreider O, Cami A, Chadwick L, Mandl KD. The Drug Data to Knowledge Pipeline: Large-Scale Claims Data Classification for Pharmacologic Insight. AMIA Jt Summits Transl Sci Proc. 2016 Jul 20;2016:105-11. eCollection 2016.
  • Aronson AR, Lang FM. The Evolution of MetaMap, a Concept Search Program for Biomedical Text AMIA Annu Symp Proc. 2009 Nov:22
  • Leroy G, Fiszman M, Rindflesch TC. The Impact of Directionality in Predications on Text Mining Hawaii International Conference on System Sciences (HICSS-41), January 2008
  • Smith LH, Rindflesch TC, Wilbur WJ. The Importance of the Lexicon in Tagging Biological Text Natural Language Engineering 2005.
  • Nguyen V, Bodenreider O, Minning T, Sheth AP. The knowledge-driven exploration of integrated biomedical knowledge sources facilitates the generation of new hypotheses Proceedings of the First International Workshop on Linked Science (LISC 2011) 2011:(electronic proceedings: http://ceur-ws.org/Vol-783/)
  • McCray AT, Browne AC, Bodenreider O. The Lexical Properties of the Gene Ontology (GO) Proc AMIA Symp. 2002;:504-8.
  • McDonald CJ, Vreeman D, Wang K, Carr C, Colins B, Abhyankar S, Deckard J, Rubin D, Langlotz C. The LOINC/RSNA Radiology Playbook: A unified terminology for radiology procedures. . In 2017 AMIA Symposium. Washington DC.
  • Mork JG, Aronson AR. The Medical Text Indexer (MTI) system for indexing biomedical literature. book chapter submitted to monograph Indexing Specialities: Medicine. Edited by L. Pilar Wyman. Medford, NJ: Information Today, Inc., in association with the American Society of Indexers, Phoenix, AZ. 2010.
  • Yaniv Z, Faruque J, Howe S, Dunn K, Sharlip D, Bond A, Perillan P, Bodenreider O, Ackerman M, Yoo TS. The national library of medicine pill image recognition challenge: An initial report. Z. Yaniv et al., "The national library of medicine pill image recognition challenge: An initial report," 2016 IEEE Applied Imagery Pattern Recognition Workshop (AIPR), Washington, DC, 2016, pp. 1-9. doi: 10.1109/AIPR.2016.8010584. http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=8010584&isnumber=8010542.
  • Aronson AR, Mork JG, Gay CW, Humphrey SM, Rogers W. The NLM Indexing Initiative's Medical Text Indexer. Stud Health Technol Inform. 2004;107(Pt 1):268-72.
  • Aronson AR, Bodenreider O, Chang HF, Humphrey SM, Mork JG, Nelson SJ, Rindflesch TC, Wilbur WJ. The NLM Indexing Initiative. Proc AMIA Symp. 2000:17-21.
  • Mork JG, Jimeno Yepes A, Aronson A. The NLM Medical Text Indexer System for Indexing Biomedical Literature. BioASQ 2013.
  • Bodenreider O, Smith B, Burugn A. The Ontology-Epistemology Divide: A Case Study in Medical Terminology Proceedings of the Third International Conference on Formal Ontology in Information Systems (FOIS2004): IOS Press; 2004. p. 185-195.
  • Overby CL, Tarczy-Hornoch P, Demner-Fushman D. The potential for automated question answering in the context of genomic medicine: An assessment of existing resources and properties of answers Summit on Translat Bioinforma. 2009 Mar 1;2009:1-25.
  • Gallagher ME, Moffatt C. The Profiles in Science Digital Library: Behind the Scenes. Proc ACM/IEEE Joint Conf Digit Libr. 2012: 433–434. doi: 10.1145/2232817.2232928.
  • Tse T, Zarin D, Williams R, Ide N. The role and importance of clinical trial registries and results databases In: Gallin JI, Ognibene FP, eds, Principles and Practice of Clinical Research. 3rd ed. Amsterdam: Academic Press; 2012: 171-81.
  • Antani SK, You D, Simpson M, Rahman M, Demner-Fushman D, Thoma GR. The role of image modality and visual characteristics in archiving biomedical images. Proc of IS&T Archiving Conference. Volume 2013, Number 1, 2013, pp. 31-35.
  • Lin J, Demner-Fushman D. The Role of Knowledge in Conceptual Retrieval: A Study in the Domain of Clinical Medicine Proc SIGIR 2006, pages 99-106, August 2006, Seattle, Washington
  • Demner-Fushman D, Hauser SE, Thoma GR. The role of title, metadata and abstract in identifying clinically relevant journal articles. AMIA Annu Symp Proc. 2005:191-5.
  • Dumontier M, Andersson B, Batchelor C, Domarew C, Jentzsch A, Luciano J, Pichler E, Prud'hommeaux E, Whetzel PL, Bodenreider O, Clark T, Harland L, Kashyap V, Kos P, Kozlovsky J, McGurk J, Ogbuji C, Samwald M, Schriml L, Tonellato PJ, Zhao J, Stephens S. The Translational Medicine Ontology: Driving Personalized Medicine by Bridging the Gap from Bedside to Bench Proceedings of the 13th ISMB'2010 SIG meeting Bio-ontologies 2010:120-123
  • Bangalore A, Thorn KE, Tilley C, Peters L. The UMLS knowledge source server: an object model for delivering UMLS data. AMIA Annu Symp Proc. 2003 Nov;:51-55.
  • Kashyap V. The UMLS Semantic Network and the Semantic Web. AMIA Annu Symp Proc. 2003:351-5.
  • Matheson NW, Ash JS (Interviewer and Editor), Sittig DF (Interviewer and Editor), Goodwin RM (Editor). The Woman Behind the NLM’s Integrated Advanced Information Management Systems (IAIMS) Initiative: 2005 Interview of Nina Matheson. Conversations with Medical Informatics Pioneers: An oral history project.
  • Roberts K, Demner-Fushman D. Toward a Natural Language Interface for EHR Questions. AMIA Jt Summits Transl Sci Proc. 2015 Mar 25;2015:157-61. eCollection 2015.

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