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Abstract

Coverage of phenotypes in standard terminologies.


Winnenburg R, Bodenreider O

Joint Bio-Ontologies and BioLINK ISMB'2014 SIG session "Phenotype Day"2014:41-44.

Abstract:

Objective: To assess the coverage of the Human Phenotype Ontology (HPO) phenotypes in standard terminologies. Methods: We map HPO terms to the UMLS and its source terminologies and compare these lexical mappings to HPO cross-references. Results: Coverage of HPO classes in UMLS is 54% and 30% in SNOMED CT. Lexical mappings largely outnumber cross-references. Conclusions: Our approach can support the development of cross-references to standard terminologies in HPO.


Winnenburg R, Bodenreider O Coverage of phenotypes in standard terminologies. 
Joint Bio-Ontologies and BioLINK ISMB'2014 SIG session "Phenotype Day"2014:41-44.

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