PUBLICATIONS

Abstract

Investigating the lexico-syntactic properties of phenotype terms – Application to interoperability between HPO and SNOMED CT.


Dhombres F, Bodenreider O

Proc Joint Bio-Ontologies and BioLINK ISMB'2015 SIG session "Phenotype Day" 2015:8-11.

Abstract:

Objective: To investigate the lexico-syntactic properties of clinical phenotype terms in order to identify partial lexical mappings between HPO and SNOMED CT. Methods: We identify modifiers HPO terms and attempt to map demodified terms to SNOMED CT through UMLS. Results: We identified partial mappings to SNOMED CT for 20% of HPO concepts with no complete mapping to SNOMED CT. Conclusions: Through complete and partial mappings, 50% of the HPO concepts can be mapped to SNOMED CT.


Dhombres F, Bodenreider O Investigating the lexico-syntactic properties of phenotype terms – Application to interoperability between HPO and SNOMED CT. 
Proc Joint Bio-Ontologies and BioLINK ISMB'2015 SIG session "Phenotype Day" 2015:8-11.

PDF