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  • Goodwin T, Demner-Fushman D. A customizable deep learning model for nosocomial risk prediction from critical care notes with indirect supervision. Journal of the American Medical Informatics Association, 2020: 27 (4), 567-576.
    Abstract | PMID:  32065628 | PMCID:  PMC7075529
  • Goodwin T, Demner-Fushman D. Bridging the Knowledge Gap: Enhancing Question Answering with World and Domain Knowledge. arXiv preprint arXiv:1910.07429
    Abstract | https://arxiv.org/abs/1910.07429
  • Abhyankar S, Demner-Fushman D, Callaghan FM, McDonald CJ. Combining structured and unstructured data to identify a cohort of ICU patients who received dialysis. J Am Med Inform Assoc. 2014 Sep-Oct;21(5):801-7. doi: 10.1136/amiajnl-2013-001915. Epub 2014 Jan 2.
    Abstract | PMID:  24384230 | PMCID:  PMC4147606
  • Demner-Fushman D, Mrabet Y, Ben Abacha A. Consumer health information and question answering: helping consumers find answers to their health-related information needs. JAMIA, 2019.
    Abstract | PMID:  31592532 | https://doi.org/10.1093/jamia/ocz152
  • Mao Y, Fung K, Demner-Fushman D. Drug-drug Interaction Extraction via Transfer Learning. AMIA Fall Symposium, 2019.
    Abstract | pub9986.pdf
  • Chowdhuri S, McCrea S, Demner-Fushman D, Overby TC. Extracting Biomedical Terms from Postpartum Depression Online Health Communities. AMIA Jt Summits Transl Sci Proc. 2019 May 6;2019:592-601.
    Abstract | pub9999.pdf | PMID:  31259014 | PMCID:  PMC6568056
  • Rodriguez L, Demner-Fushman D. Finding Understudied Disorders Potentially Associated withMaternal Morbidity and Mortality AMIA Informatics Summit, March 2019.
    Abstract | pub10002.pdf
  • Callaghan FM, Leishear K, Abhyankar S, Demner-Fushman D, McDonald CJ. High vitamin B12 levels are not associated with increased mortality risk for ICU patients after adjusting for liver function: a cohort study. ESPEN J. 2014 Apr 1;9(2):e76-e83.
    Abstract | PMID:  24665415 | PMCID:  PMC3961712
  • Abhyankar S, Leishear K, Callaghan FM, Demner-Fushman D, McDonald CJ. Lower short- and long-term mortality associated with overweight and obesity in a large cohort study of adult intensive care unit patients. Crit Care. 2012 Dec 18;16(6):R235. doi: 10.1186/cc11903.
    Abstract | PMID:  23249446 | PMCID:  PMC3672624
  • Zeiss CJ, Donwook S, Vander Wyk B, Beck AP, Zatz N, Sneiderman CA, Kilicoglu H. Menagerie: A text-mining tool to support animal-human translation in neurodegeneration research. PLoS One. 2019 Dec 17;14(12):e0226176. doi: 10.1371/journal.pone.0226176. eCollection 2019.
    Abstract | PMID:  31846471 | PMCID:  PMC6917268
  • Allam A, Magy M, Thoma G, Krauthammer M. Neural networks versus Logistic regression for 30 days all-cause readmission prediction. Sci Rep. 2019 Jun 26;9(1):9277. doi: 10.1038/s41598-019-45685-z.
    Abstract | PMID:  31243311 | PMCID:  PMC6595068
  • Mrabet Y, Demner-Fushman D. On Agreements in Visual Understanding. 2019 Conference on Neural Information Processing Systems. 2019 Conference on Neural Information Processing Systems, December 8-14, 2019. Vancouver, Canada.
    Abstract | pub9983.pdf
  • Zolnoori M, Fung K, Patrick DB, Fontelo P, Kharrazi H, Faiola A, Shah ND, Shirley WYS, Eldredge CE, Luo J, Conway M, Zhu J, Park SK, Xu K, Moayyed H. The PsyTAR dataset: From patients generated narratives to a corpus of adverse drug events and effectiveness of psychiatric medications. Data Brief. 2019 Mar 15;24:103838. doi: 10.1016/j.dib.2019.103838. eCollection 2019 Jun.
    Abstract | PMID:  31065579 | PMCID:  PMC6495095
  • Voorhees EM, Alam T, Bedrick S, Demner-Fushman D, Hersh WR, Lo K, Roberts K, Soboroff I, Wang LL. TREC-COVID: Constructing a Pandemic Information Retrieval Test Collection. CoRR abs/2005.04474 (2020)
    Abstract | https://arxiv.org/abs/2005.04474
  • Roberts K, Alam T, Bedrick S, Demner-Fushman D, Lo K, Soboroff I, Voorhees E, Wang LL, Hersh WR. TREC-COVID: Rationale and Structure of an Information Retrieval Shared Task for COVID-19. Journal of the American Medical Informatics Association, 2020.
    Abstract | https://academic.oup.com/jamia/article/doi/10.1093/jamia/ocaa091/5828938
  • Rajaraman S, Antani SK. Visualizing Salient Network Activations in Convolutional Neural Networks for Medical Image Modality Classification. Santosh K., Hegadi R. (eds) Recent Trends in Image Processing and Pattern Recognition. RTIP2R 2018. Communications in Computer and Information Science, vol 1036. Springer, Singapore
    Abstract | pub9943.pdf