| National Library of Medicine

Simpson M, Ford G, Antani S, Demner-Fushman D, Thoma GR. A Lightweight Statistics Package for Interactive Publications Poster at 20th NIH Research Festival (TECH-15), September 2007, National Institutes of Health

Abstract | pub2007071.pdf

Demner-Fushman D, Lin J. Answering Clinical Questions with Knowledge-based and Statistical Techniques Computational Linguistics. 2007 Jan;33(1):63-103

Abstract | pub2007004.pdf

Kim I, Le DX, Thoma GR. Automated method for extracting "citation sentences" from online biomedical articles using SVM-based text summarization technique. Proc. the 2014 IEEE Int'l Conf. on Systems, Man, and Cybernetics (SMC 2014), pp. 2006-2011, San Diego, October, 2014

Abstract | http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=6974213

Demner-Fushman D, Few B, Hauser SE, Thoma GR. Automatically Identifying Health Outcome Information in MEDLINE Records J Am Med Inform Assoc. 2006 Jan-Feb;13(1):52-60. Epub 2005 Oct 12.

Abstract | pub2006005.pdf | PMID: 16221937 | PMCID: PMC1380197

Abhyankar S, Demner-Fushman D, Callaghan FM, McDonald CJ. Combining structured and unstructured data to identify a cohort of ICU patients who received dialysis. J Am Med Inform Assoc. 2014 Sep-Oct;21(5):801-7. doi: 10.1136/amiajnl-2013-001915. Epub 2014 Jan 2.

Abstract | PMID: 24384230 | PMCID: PMC4147606

Mao Y, Fung K, Demner-Fushman D. Drug-drug Interaction Extraction via Transfer Learning. AMIA Fall Symposium, 2019.

Abstract | pub9986.pdf

Ide NC, Loane RF, Demner-Fushman D. Essie: A Concept-based Search Engine for Structured BiomedicalText J Am Med Inform Assoc. 2007 May-Jun;14(3):253-63. Epub 2007 Feb 28

Abstract | pub2007019.pdf | PMID: 17329729 | PMCID: PMC2244877

Driessen J, Baik SH, Zhang Y. Explaining Improved Use of High-Risk Medications in Medicare Between 2007 and 2011. J Am Geriatr Soc. 2016 Mar;64(3):674-6. doi: 10.1111/jgs.14000.

Abstract | PMID: 27000357 | PMCID: PMC4806390

Rodriguez L, Demner-Fushman D. Finding Understudied Disorders Potentially Associated withMaternal Morbidity and Mortality AMIA Informatics Summit, March 2019.

Abstract | pub10002.pdf

Callaghan FM, Leishear K, Abhyankar S, Demner-Fushman D, McDonald CJ. High vitamin B12 levels are not associated with increased mortality risk for ICU patients after adjusting for liver function: a cohort study. ESPEN J. 2014 Apr 1;9(2):e76-e83.

Abstract | PMID: 24665415 | PMCID: PMC3961712

Thoma GR, Ford G, Antani SK, Demner-Fushman D, Chung M, Simpson M. Interactive Publication: The document as a research tool. Web Semant. 2010 Jul 1;8(2-3):145-150.

Abstract | pub2010026.pdf | PMID: 20657757 | PMCID: PMC2908409

Zou J, Le DX, Thoma GR. Locating and parsing bibliographic references in HTML medical articles. Int J Doc Anal Recognit. 2010 Jun 1;13(2):107-119.

Abstract | pub2010024.pdf | PMID: 20640222 | PMCID: PMC2903768

Abhyankar S, Leishear K, Callaghan FM, Demner-Fushman D, McDonald CJ. Lower short- and long-term mortality associated with overweight and obesity in a large cohort study of adult intensive care unit patients. Crit Care. 2012 Dec 18;16(6):R235. doi: 10.1186/cc11903.

Abstract | PMID: 23249446 | PMCID: PMC3672624

Zeiss CJ, Donwook S, Vander Wyk B, Beck AP, Zatz N, Sneiderman CA, Kilicoglu H. Menagerie: A text-mining tool to support animal-human translation in neurodegeneration research. PLoS One. 2019 Dec 17;14(12):e0226176. doi: 10.1371/journal.pone.0226176. eCollection 2019.

Abstract | PMID: 31846471 | PMCID: PMC6917268

Thoma GR. Mobile App: Turning the Pages

Abstract

Allam A, Magy M, Thoma G, Krauthammer M. Neural networks versus Logistic regression for 30 days all-cause readmission prediction. Sci Rep. 2019 Jun 26;9(1):9277. doi: 10.1038/s41598-019-45685-z.

Abstract | PMID: 31243311 | PMCID: PMC6595068

Narum R, Zou J, Antani SK. Semi-Automated Ground-Truth Data Collection and Annotation for Journal Figure Analysis [Poster]. 2016 NIH Research Festival

Abstract | pub9435.pdf

Zhang Y, Baik SH, Zuvekas SH. Simulating Variation in Families' Spending across Marketplace Plans. Health Serv Res. 2018 Feb 14. doi: 10.1111/1475-6773.12831. [Epub ahead of print]

Abstract | PMID: 29446065 | PMCID: PMC6051972 | https://doi.org/10.1111/1475-6773.12831

Thoma GR, Ford G, Demner-Fushman D, Antani SK, Chung M. Software: Panorama

Abstract

Hsu W, Long LR, Antani SK. SPIRS: A Framework for Content-based Image Retrieval from Large Biomedical Databases Stud Health Technol Inform. 2007;129(Pt 1):188-92.

Abstract | pub2007042.pdf | PMID: 17911704

Rodriguez L, Morrison SM, Greenberg K, Demner-Fushman D. Towards Automatic Discovery of Genes Related to Human Placenta [Poster]. Poster Fall AMIA 2016.

Abstract | pub9451.pdf

Jarlenski M, Baik SH, Zhang Y. Trends in Use of Medications for Smoking Cessation in Medicare, 2007-2012. Am J Prev Med. 2016 Sep;51(3):301-8. doi: 10.1016/j.amepre.2016.02.018. Epub 2016 Mar 30.

Abstract | PMID: 27036506 | PMCID: PMC4992646

Lingappa G, Thoma GR, Antani SK. Web Interface: MyMorph

Abstract

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