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  • McDonald CJ, Dexter P, Schadow G, Chueh HC, Agernathy G, Hook J, Blevins L, Overhage JM, Berman JJ. SPIN query tools for de-identified research on a humongous database. AMIA Annu Symp Proc. 2005:515-9.
  • Vreeman DJ, McDonald CJ. Automated mapping of local radiology terms to LOINC. AMIA Annu Symp Proc. 2005:769-73.
  • McDonald CJ, Overhage JM, Barnes M, Schadow G, Blevins L, Dexter PR, Mamlin BW. The Indiana network for patient care: a working local health information infrastructure. An example of a working infrastructure collaboration that links data from five health systems and hundreds of millions of entries. Health Aff (Millwood). 2005 Sep-Oct;24(5):1214-20.
  • Sears C, Prescott V, McDonald CJ. The Indiana Network for Patient Care: A Case Study of a Successful Healthcare Data Sharing Agreement. Am Bar Assoc Health eSource. Sept 2005; 2(1), p1-15.
  • Laflamme MR, Wilcox DC, Sullivan J, Schadow G, Lindbergh D, Warvel J, Buchanan H, Ising T, Abernathy G, Perkins SM, Daggy J, Frankel RM, Dexter P, McDonald CJ, Weiner M. A pilot study of usefulness of clinician-patient videoconferencing for making routine medical decisions in the nursing home. J Am Geriatr Soc. 2005 Aug;53(8):1380-5.
  • Jing X, Kay S, Hardiker NR. Bio-health information: a preliminary review of on-line cystic fibrosis resources. Stud Health Technol Inform. 2005;116:21-6.
  • Weiner M, Stump TE, Callahan CM, Lweis JN, McDonald CJ. Pursuing integration of performance measures into electronic medical records: beta-adrenergic receptor antagonist medications. Qual Saf Health Care. 2005 Apr;14(2):99-106.
  • Dexter PR, Perkins SM, Maharry KS, Jones K, McDonald CJ. Inpatient computer-based standing orders vs physician reminders to increase influenza and pneumococcal vaccination rates: a randomized trial. JAMA. 2004 Nov 17;292(19):2366-71.
  • Zafar A, Mamlin B, Perkins S, Belsito AM, Overhage JM, McDonald CJ. A simple error classification system for understanding sources of error in automatic speech recognition and human transcription. Int J Med Inform. 2004 Sep;73(9-10):719-30.
  • Kroth PJ, Murray MD, McDonald CJ. Undertreatment of osteoporosis in women, based on detection of vertebral compression fractures on chest radiography. Am J Geriatr Pharmacother. 2004 Jun;2(2):112-8.
  • Bodenreider O, McCray AT. Exploring Semantic Groups Through Visual Approaches J Biomed Inform. 2003 Dec;36(6):414-432.
  • McGowan JJ, Overhage JM, Barnes M, McDonald CJ. Indianapolis I3: the third generation Integrated Advanced Information Management Systems. J Med Libr Assoc. 2004 Apr;92(2):179-87.
  • Murray MD, Harris LE, Overhage JM, Zhou XH, Eckert GJ, Smith FE, Buchanan NN, Wolinsky FD, McDonald CJ, Tierney WM. Failure of computerized treatment suggestions to improve health outcomes of outpatients with uncomplicated hypertension: results of a randomized controlled trial. Pharmacotherapy. 2004 Mar;24(3):324-37.
  • Grannis SJ, Overhage JM, McDonald CJ. Real world performance of approximate string comparators for use in patient matching. Stud Health Technol Inform. 2004;107(Pt 1):43-7.
  • Tierney VM, Overhage JM, Murray MD, Harris LE, Zhou XH, Eckert GJ, Smith FE, Nienaber N, McDonald CJ, Wolinsky FD. Effects of computerized guidelines for managing heart disease in primary care. J Gen Intern Med. 2003 Dec;18(12):967-76.
  • Biondich PG, Anand V, Downd SM, McDonald CJ. Using adaptive turnaround documents to electronically acquire structured data in clinical settings. AMIA Annu Symp Proc. 2003:86-90.
  • Grannis SJ, Overhage JM, Hui S, McDonald CJ. Analysis of a probabilistic record linkage technique without human review. AMIA Annu Symp Proc. 2003:259-63.
  • Mamlin BW, Heinze DT, McDonald CJ. Automated extraction and normalization of findings from cancer-related free-text radiology reports. AMIA Annu Symp Proc. 2003:420-4.
  • Schadow G, McDonald CJ. Extracting structured information from free text pathology reports. AMIA Annu Symp Proc. 2003:584-8.
  • Weiner M, Schadow G, Lindbergh D, Warvel J, Abernathy G, Perkins SM, Fyffe J, Dexter PR, McDonald CJ. Clinicians' and patients' experiences and satisfaction with unscheduled, nighttime, Internet-based video conferencing for assessing acute medical problems in a nursing facility. AMIA Annu Symp Proc. 2003:709-13.
  • Bodenreider O, Mitchell JA, McCray AT. Evaluation of the UMLS as a Terminology and Knowledge Resource for Biomedical Informatics Proc AMIA Symp. 2002:61-65.
  • McCray AT, Bodenreider O. A Conceptual Framework for the Biomedical Domain The Semantics of Relationships: An Interdisciplinary Perspective. Boston: Kluwer Academic Publishers. 2002;:181-198.
  • Mitchell JA, McCray AT, Bodenreider O. From Phenotype to Genotype: Navigating the Available Information Resources Proc AMIA Symp. 2002;:1109.
  • Weiner M, Callahan CM, Tierney WM, Overhage JM, Mamlin B, Dexter PR, McDonald CJ. Using information technology to improve the health care of older adults. Ann Intern Med. 2003 Sep 2;139(5 Pt 2):430-6.
  • Weiner M, Stump TE, Callahan CM, Lewis JN, McDonald CJ. A practical method of linking data from Medicare claims and a comprehensive electronic medical records system. Int J Med Inform. 2003 Aug;71(1):57-69.
  • Murray MD, Smith FE, Fox J, Teal EY, Kesterson JG, Stiffler TA, Ambuehl RJ, Wang J, Dibble M, Benge DO, Betley LJ, Tierney WM, McDonald CJ. Structure, functions, and activities of a research support informatics section. J Am Med Inform Assoc. 2003 Jul-Aug;10(4):389-98. Epub 2003 Mar 28.
  • McDonald CJ, Huff SM, Suico JG, Hill G, Leavelle D, Aller R, Forrey A, Mercer K, DeMoor G, Hook J, Williams W, Case J, Maloney P. LOINC, a universal standard for identifying laboratory observations: a 5-year update. Clin Chem. 2003 Apr;49(4):624-33.
  • McDonald CJ, Shadow G, Barnes M, Dexter P, Overhage M, Mamlin B, McCoy J. Open source software in medical informatics—why, how and what. Int J Med Inform 2003 vol: 69 (2-3) pp: 175-184.
  • Biondich PG, Overhage JM, Dexter PR, Downs SM, Lemmon L, McDonald CJ. A modern optical character recognition system in a real world clinical setting: some accuracy and feasibility observations. Proc AMIA Symp. 2002:56-60.
  • Grannis SJ, Overhage JM, McDonald CJ. Analysis of identifier performance using a deterministic linkage algorithm. Proc AMIA Symp. 2002:305-9.
  • Thomas SM, Mamlin B, Schadow G, McDonald CJ. A successful technique for removing names in pathology reports using an augmented search and replace method. Proc AMIA Symp. 2002:777-81.
  • Weiner M, Schadow G, Lindbergh D, Warvel J, Abernathy G, Perkins SM, Dexter PR, McDonald CJ. Conducting a study of Internet-based video conferencing for assessing acute medical problems in a nursing facility. Proc AMIA Symp. 2002:874-8.
  • Weinberger M, Murray MD, Marrero DG, Brewer N, Lykens M, Harris LE, Seshadri R, Caffrey H, Roesner JF, Smith F, Newell AJ, Collins JC, McDonald CJ, Tierney WM. Effectiveness of pharmacist care for patients with reactive airways disease: a randomized controlled trial. JAMA. 2002 Oct 2;288(13):1594-602.
  • Overhage JM, Dexter PR, Perkins SM, Cordell WH, McGoff J, McGrath R, McDonald CJ. A randomized, controlled trial of clinical information shared from another institution. Ann Emerg Med. 2002 Jan;39(1):14-23.
  • Schadow G, Grannis S, McDonald CJ. Privacy-Preserving Distributed Queries for a Clinical Case Research Network. IEEE International Conference on Data Mining Workshop on Privacy, Security, and Data Mining City: Maebashi City, Japan 2002 vol: 14 pp: 55-65.
  • McDonald CJ. Hickam 2000: the maturation of, and linkages between, medical informatics and bioinformatics. J Lab Clin Med. 2001 Dec;138(6):359-66.
  • Schadow G, Russler DC, McDonald CJ. Conceptual alignment of electronic health record data with guideline and workflow knowledge. Int J Med Inform. 2001 Dec;64(2-3):259-74.
  • Kroth PJ, Belsito A, Overhage JM, McDonald CJ. Bedside vital signs capture for the non-ICU setting--an open source, PC-based solution. Proc AMIA Symp. 2001:344-8.
  • Overhage JM, Aisen A, Barnes M, Tucker M, McDonald CJ. Integration of radiographic images with an electronic medical record. Proc AMIA Symp. 2001:513-7.
  • Schadow G, Barnes MR, McDonald CJ. Representing and querying conceptual graphs with relational database management systems is possible. Proc AMIA Symp. 2001:598-602.
  • Thomas SM, Overhage JM, Warvel J, McDonald CJ. A comparison of a printed patient summary document with its electronic equivalent: early results. Proc AMIA Symp. 2001:701-5.
  • Overhage JM, Suico J, McDonald CJ. Electronic laboratory reporting: barriers, solutions and findings. J Public Health Manag Pract. 2001 Nov;7(6):60-6.
  • Dexter PR, Perkins S, Overhage JM, Maharry K, Kohler RB, McDonald CJ. A computerized reminder system to increase the use of preventive care for hospitalized patients. N Engl J Med. 2001 Sep 27;345(13):965-70.
  • McDonald CJ, Schadow G, Suico J, Overhage JM. Data standards in health care. Ann Emerg Med. 2001 Sep;38(3):303-11.
  • Overhage JM, Perkins S, Tierney WM, McDonald CJ. Controlled trial of direct physician order entry: effects on physicians' time utilization in ambulatory primary care internal medicine practices. J Am Med Inform Assoc. 2001 Jul-Aug;8(4):361-71.
  • Schadow G, Russler DC, Mead CN, McDonald CJ. Integrating medical information and knowledge in the HL7 RIM. Proc AMIA Symp. 2000:764-8.
  • McDonald CJ, Schadow G, Suico J, Heilmann K. Sprechen Sie LOINC. HL7 Mitteilugen, Germany. 2000. P 6-11.
  • Olesen H, Ibsen I, Bruunshuus I, Kenny D, Dybkaer R, Fuentes-Arderiu X, Hill G, Soares de Araujo P, McDonald CJ. Properties and Units in the Clinical Laboratory Sciences. Part X. Pure Appl Chem 2000 vol: 72 (5) pp: 889-962.
  • Schadow G, Russler DC, McDonald CJ. Conceptual integration of guidelines and workflow into the electronic health record. Stud Health Technol Inform. 2000;77:807-11.
  • McDonald CJ, Overhage JM, Tierney WM, Dexter PR, Martin DK, Suico JG, Zafar A, Schadow G, Blevins L, Glazener T, Meeks-Johnson J, Lemmon L, Warvel J, Porterfield B, Cassidy P, Lindbergh D, Belsito A, Tucker M, Williams B, Wodniak C. The Regenstrief Medical Record System: a quarter century experience. Int J Med Inform. 1999 Jun;54(3):225-53.

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