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  • McDonald CJ, Abhyankar S. Moving, merging, managing, and mining clinical data for care and research. April 2011 Technical Report to the LHNCBC Board of Scientific Counselors.
  • Zarin DA, Tse T, Williams RJ, Califf RM, Ide NC. The ClinicalTrials.gov results database--update and key issues. N Engl J Med. 2011 Mar 3;364(9):852-60. doi: 10.1056/NEJMsa1012065.
  • Lin MC, Vreeman DJ, McDonald CJ, Huff SM. A characterization of local LOINC mapping for laboratory tests in three large institutions. Methods Inf Med. 2011;50(2):105-14. doi: 10.3414/ME09-01-0072. Epub 2010 Aug 20.
  • Zarin DA, Califf R. Point Counterpoint: ClinicalTrials.gov: Bureaucratic Nuisance or Opportunity to Improve the Field? APOR 2010 Nov; 6 (2): 3-5
  • Fung KW, McDonald C, Srinivasan S. The UMLS-CORE project: a study of the problem list terminologies used in large healthcare institutions. J Am Med Inform Assoc. 2010 Nov-Dec;17(6):675-80. doi: 10.1136/jamia.2010.007047.
  • Willams RJ, Tse T, Harlan WR, Zarin DA. Registration of observational studies: is it time? CMAJ. 2010 Oct 19;182(15):1638-42. doi: 10.1503/cmaj.092252. Epub 2010 Jul 19.
  • LHNCBC. Lister Hill National Center for Biomedical Communications Annual Report FY2010 September 2010
  • Friedlin J, McDonald CJ. An evaluation of medical knowledge contained in Wikipedia and its use in the LOINC database. J Am Med Inform Assoc. 2010 May-Jun;17(3):283-7. doi: 10.1136/jamia.2009.001180.
  • Downs SM, van Dyck PC, Rinaldo P, McDonald CJ, Howell RR, Zuckerman A, Downing G. Improving newborn screening laboratory test ordering and result reporting using health information exchange. J Am Med Inform Assoc. 2010 Jan-Feb;17(1):13-8. doi: 10.1197/jamia.M3295.
  • Vreeman DJ, McDonald C, Huff SM. LOINC® - A Universal Catalog of Individual Clinical Observations and Uniform Representation of Enumerated Collections. Int J Funct Inform Personal Med. 2010;3(4):273-291. Epub 2011 May 23.
  • Baorto D, Li L, Cimino JJ. Practical Experience with the Maintenance of a Large Ontology for an Academic Medical Center Journal of Biomedical Informatics; 2009 Jun;42(3):494-503)
  • Demner-Fushman D, Chapman WW, McDonald CJ. What can natural language processing do for clinical decision support? J Biomed Inform. 2009 Oct;42(5):760-72. doi: 10.1016/j.jbi.2009.08.007. Epub 2009 Aug 13.
  • Simonaitis L, McDonald CJ. Using National Drug Codes and drug knowledge bases to organize prescription records from multiple sources. Am J Health Syst Pharm. 2009 Oct 1;66(19):1743-53. doi: 10.2146/ajhp080221.
  • LHNCBC. Lister Hill National Center for Biomedical Communications FY2009 Annual Report September 2009
  • Dawson L, Zarin DA, Emanuel EJ, Friedman LM, Chaudhari B, Goodman SN. Considering usual medical care in clinical trial design. PLoS Med. 2009 Sep;6(9):e1000111. doi: 10.1371/journal.pmed.1000111. Epub 2009 Sep 29.
  • Tse T, Williams RJ, Zarin DA. Reporting "basic results" in ClinicalTrials.gov. Chest. 2009 Jul;136(1):295-303. doi: 10.1378/chest.08-3022.
  • Tse T, Williams RJ, Zarin DA. Update on Registration of Clinical Trials in ClinicalTrials.gov. Chest. 2009 Jul;136(1):304-5. doi: 10.1378/chest.09-1219.
  • Zarin DA. Clinical trials registry expands. Interview by Bridget M. Kuehn. JAMA. 2009 Jul 1;302(1):22. doi: 10.1001/jama.2009.891.
  • Cimino JJ, Hayamizu TF, Bodenreider O, Davis B, Stafford GA, Ringwald M. The caBIG terminology review process. J Biomed Inform. 2009 Jun;42(3):571-80. doi: 10.1016/j.jbi.2008.12.003. Epub 2008 Dec 25.
  • Zhu X, Fan JW, Baort D, Weng C, Cimino JJ. A review of auditing methods applied to the content of controlled biomedical terminologies. J Biomed Inform. 2009 Jun;42(3):413-25. doi: 10.1016/j.jbi.2009.03.003. Epub 2009 Mar 12.
  • Gardner RM, Overhage JM, Steen EB, Munger BS, Holmes JH, Williamson JJ, Detmer DE, Ash JS, Cimino JJ, Covvey D, Gardner RM, Nelson NC, Safran C, Shiffman RN, Spallek H, AMIA Board of Directors. Core content for the subspecialty of clinical informatics. J Am Med Inform Assoc. 2009 Mar-Apr;16(2):153-7. Epub 2008 Dec 11
  • McDonald CJ. Protecting Patients In Health Information Exchange: A Defense Of The HIPAA Privacy Rule. Health Aff (Millwood). 2009 Mar-Apr;28(2):447-9. doi: 10.1377/hlthaff.28.2.447.
  • McDonald CJ, Hill G. IUPAC Silver Book- Compendium of Terminology and Nomenclature of Properties in Clinical Laboratory Sciences - Chapter 8 - Kinds-of-Quantity of Dimension One. SI Unit 1. Royal Society of Chemistry; 2009. doi:10.1039/978178262245.1-00075.
  • Collins SA, Currie LM, Bakken S, Cimino JJ. Information needs, infobutton manager use, and satisfaction by clinician type: a case study. J Am Med Inform Assoc. 2009 Jan-Feb;16(1):140-2. Epub 2008 Oct 24.
  • Tse T, Zarin DA. Clinical Trial Registration and Results Reporting: ClinicalTrials.gov and FDAAA FDLI Update. 2009 Jan/Feb;1:18-22
  • Pontet F, Magdal Petersen U, Fuentes-Arderiu X, Nordin G, Bruunshuus I, Ihalainen J, Karlsson D, Forsum U, Dybkaer R, Schadow G, Kuelpmann W, Ferard G, Kang D, McDonald C, Hill G. Clinical laboratory sciences data transmission: the NPU coding system. Stud Health Technol Inform. 2009;150:265-9.
  • Hansen RA, Wanzhu T, Wang J, Ambuehl R, McDonald CJ, Murray MD. Risk of adverse gastrointestinal events from inhaled corticosteroids. 2008 Nov;28(11):1325-34.
  • Zarin DA, Tse T. Tracking health services research studies [Letter]. JAMA. 2008 Nov 19;300(19):2252; author reply 2252. doi: 10.1001/jama.2008.612.
  • Friedlin FJ, McDonald C. A Software Tool for Removing Patient Identifying Information from Clinical Documents J Am Med Inform Assoc. 2008 Sep-Oct;15(5):601-10. Epub 2008 Jun 25
  • LHNCBC. Lister Hill National Center for Biomedical Communications FY2008 Annual Report September 2008
  • Kho AN, Lemmon L, Commiskey M, Wilson SJ, McDonald C. Use of a Regional Health Information Exchange to Detect Crossover of Patients with MRSA between Urban Hospitals J Am Med Inform Assoc. 2008 Mar-Apr;15(2):212-6. Epub 2007 Dec 20.
  • Kho AN, Dexter PR, Warvel JS, Belsito AW, Commiskey M, Wilson SJ, Hui SL, McDonald CJ. An Effective Computerized Reminder for Contact Isolation of Patients Colonized or Infected with Resistant Organisms Int J Med Inform. 2008 Mar;77(3):194-8. Epub 2007 Mar 29
  • Zarin DA, Tse T. Moving Towards Transparency of Clinical Trials Science. 2008 Mar 7;319(5868):1340-2.
  • Overhage JM, Grannis S, McDonald CJ. A comparison of the completeness and timeliness of automated electronic laboritory reporting and spontaneous reporting of notifiable conditions. Am J Public Health. 2008 Feb;98(2):344-50. Epub 2008 Jan 2
  • Mamlin BW, Overhage JM, Tierney WM, Dexter PR, McDonald CJ. Clinical decision support within the Regenstrief Medical Record System [Book//chapter] Health Informatics, Berner, Eta S. (Ed.) 2nd ed., 2007, 190-21.
  • LHNCBC. Lister Hill National Center for Biomedical Communications Annual Report FY 2007 September 2007
  • Drake TA, Braun J, Marchevsky A, Kohan IS, Fletcher C, Chueh H, Beckwith B, Berkowicz D, Kuo F, Zeng QT, Balis U, Holzbach A, McMurry A, Gee CE, McDonald C, Schadow G, Davis M, Hattab EM, Blevins L, Hook J, Becich M, Crowley RS, Taube SE, Berman J. A System for Sharing Routine Surgical Pathology Specimens Across Institutions: The Shared Pathology Informatics Network Hum Pathol. 2007 Aug;38(8):1212-25. Epub 2007 May 8
  • Jing X, Kay S, Hardiker N, Marley T. Ontology-based knowledge base model construction-OntoKBCF. Stud Health Technol Inform. 2007;129(Pt 1):785-90.
  • Zarin DA, Ide NC, Tse T, Harlan WR, West JC, Lindberg DA. Issues in the registration of clinical trials. JAMA. 2007 May 16;297(19):2112-20
  • Zarin DA. Scientific Issues in the Registration of Clinical Trials April 2007 Technical Report to the LHNCBC Board of Scientific Counselors.
  • Drazen JM, Zarin DA. Salvation by Registration N Engl J Med 356;2
  • Zarin DA, Keselman A. Registering a Clinical Trial in ClinicalTrials.gov Chest. 2007 Mar;131(3):909-12. Epub 2007 Feb 15
  • Kho AN, Hui S, Kesterson JG, McDonald C. Which observations from the complete blood cell count predict mortality for hospitalized patients? J Hosp Med. 2007 Jan;2(1):5-12.
  • Fomous C, Mitchell JA, McCray A. Genetics Home Reference: Helping Patients Understand the Role of Genetics in Health and Disease Community Genet. 2006;9(4):274-8
  • LHNCBC. Lister Hill National Center for Biomedical Communications Annual Report FY 2006 September 2006
  • Sittig DF, Ash JS, Ledley RS. The story behind the development of the first whole-body computerized tomography scanner as told by Robert S. Ledley. J Am Med Inform Assoc. 2006 Sep-Oct;13(5):465-9. Epub 2006 Jun 23.
  • Marino-Ramirez L, Bodenreider O, Kantz N, Jordan IK. Co-evolutionary Rates of Functionally Related Yeast Genes Evolutionary Bioinformatics Online 2006;2:295-300.
  • McDonald CJ. Computerization can create safety hazards: a bar-coding near miss. Ann Intern Med. 2006 Apr 4;144(7):510-6.
  • Thomsen RW, Riis A, Norgaard M, Jacobsen J, Christensen S, McDonald CJ, Sorensen HT. Rising incidence and persistently high mortality of hospitalized pneumonia: a 10-year population-based study in Denmark. J Intern Med. 2006 Apr;259(4):410-7.
  • Jing X, Kay S, Hardiker N. Designing a bio-health information assistant within an EHR. Healthcare Computing 2006: 325-326 (Harrogate, England).

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