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  • Almubarak H, Guo P, Stanley RJ, Long LR, Antani SK, Thoma GR. Algorithm Enhancements for Improvement of Localized Classification of Uterine Cervical Cancer Digital Histology Images. in Handbook of Research on Emerging Perspectives on Healthcare Information Systems and Informatics,. IGI Global (Hershey, PA).
  • Thamizhvani TR, Lakshmanan S, Rajaraman S. Computer Aided Diagnosis of Skin Tumours from Dermal Images. Hemanth D., Smys S. (eds) Computational Vision and Bio Inspired Computing. Lecture Notes in Computational Vision and Biomechanics, vol 28. Springer, Cham
  • Kilicoglu H, Ben Abacha A, Mrabet Y, Shooshan SE, Rodriguez L, Masterton K, Demner-Fushman D. Semantic annotation of consumer health questions. BMC Bioinformatics. 2018 Feb 6;19(1):34. doi: 10.1186/s12859-018-2045-1.
  • Zweigenbaum P, Demner-Fushman D. Advanced Literature-Mining Tools. In Edwards D, Stajich J, and Hansen D. (Editors). Bioinformatics: Tools and Applications. Springer 2009.
  • Demner-Fushman D. A dataset of 200 structured product labels annotated for adverse drug reactions. Sci Data. 2018 Jan 30;5:180001. doi: 10.1038/sdata.2018.1.
  • Poostchi M, Silamut K, Maude RJ, Jaeger S, Thoma GR. Image analysis and machine learning for detecting malaria. Transl Res. 2018 Apr;194:36-55. doi: 10.1016/j.trsl.2017.12.004. Epub 2018 Jan 12.
  • Moallem G, Poostchi M, Yu H, Palaniappan N, Silamut K, Maude RJ, Hossain Md Amir, Jaeger S, Antani SK, Thoma GR. Detecting and Segmenting White Blood Cells in Microscopy Images of Thin Blood Smears [Poster]. Annual Meeting of the American Society of Tropical Medicine & Hygiene (ASTMH), Poster, 2017
  • Moallem G, Jaeger S, Poostchi M, Palaniappan N, Yu H, Silamut K, Maude RJ, Antani SK, Thoma GR. White Blood Cell Detection and Segmentation in Microscopy Images of Thin Blood Smears [Poster]. NIH Research Festival, Poster, 2017
  • Zhang, K, Demner-Fushman D. Automated classification of eligibility criteria in clinical trials to facilitate patient-trial matching for specific patient populations. J Am Med Inform Assoc. 2017 Jul 1;24(4):781-787. doi: 10.1093/jamia/ocw176.
  • Borovikov E, Vajda S, Gill MJ. Face Match for Family Reunification: Real-World Face Image Retrieval International Journal of Computer Vision and Image Processing. DOI: 10.4018/IJCVIP.2017040102.
  • Roberts K, Boland MR, Pruinelli L, Dcruz J, Berry A, Georgsson M, Hazen R, Sarmiento RF, Backonja U, Yu K-H, Jiang Y, Brennan PF. Biomedical informatics advancing the national health agenda: the AMIA 2015 year-in-review in clinical and consumer informatics. J Am Med Inform Assoc. 2017 Apr 1;24(e1):e185-e190. doi: 10.1093/jamia/ocw103.
  • Mork JG, Aronson A, Demner-Fushman D. 12 years on - Is the NLM medical text indexer still useful and relevant? J Biomed Semantics. 2017 Feb 23;8(1):8. doi: 10.1186/s13326-017-0113-5.
  • Lure F, Jaeger S, Antani SK. Automated Systems for microscopic and radiographic tuberculosis screening. Electronic Journal of Emerging Infectious Diseases, Vol. 2, No. 1, pp. 5-9, February 2017. [In Chinese]
  • Demner-Fushman D, Rogers W, Aronson A. MetaMap Lite: an evaluation of a new Java implementation of MetaMap. J Am Med Inform Assoc. 2017 Jul 1;24(4):841-844. doi: 10.1093/jamia/ocw177.
  • KC S, Antani SK. Automated chest X-ray screening: Can lung region symmetry help detect pulmonary abnormalities? IEEE Transactions on Medical Imaging. doi: https://doi.org/10.1109/TMI.2017.2775636.
  • KC S, Aafaque A, Antani SK, Thoma GR. Line Segment-Based Stitched Multipanel Figure Separation for Effective Biomedical CBIR. Int. J. Patt. Recogn. Artif. Intelligence 31, 1757003 (2017) https://doi.org/10.1142/S0218001417570038.
  • Deardorff A, Masterton K, Roberts K, Kilicoglu H, Demner-Fushman D. A protocol-driven approach to automatically finding authoritative answers to consumer health questions in online resources. JASIST, 68(7): 1724-1736. doi: 10.1002/asi.23806.
  • Cohen T, Roberts K, Gururaj AE, Chen X, Pournejati S, Alter G, Hersh WR, Demner-Fushman D, Ohno-Machado L, Lu H. A publicly available benchmark for biomedical dataset retrieval: the reference standard for the 2016 bioCADDIE dataset retrieval challenge. Database (Oxford). 2017 Jan 1;2017. doi: 10.1093/database/bax061.
  • Guo P, Almubarak H, Banerjee K, Stanley RJ, Long LR, Antani SK, Thoma GR, Zuna R, Frazier S, Moss R, Stoecker W. Enhancements in localized classification for uterine cervical cancer digital histology image assessment. J Pathol Inform. 2016 Dec 30;7:51. doi: 10.4103/2153-3539.197193. eCollection 2016.
  • Borovikov E, Vajda S. FaceMatch: real-world face image retrieval. In: Santosh K., Hangarge M., Bevilacqua V., Negi A. (eds) Recent Trends in Image Processing and Pattern Recognition. RTIP2R 2016. Communications in Computer and Information Science, vol 709. Springer, Singapore. 405-419.
  • Narum R, Zou J, Antani SK. Semi-Automated Ground-Truth Data Collection and Annotation for Journal Figure Analysis [Poster]. 2016 NIH Research Festival
  • Jaeger S, Silamut K, Yu H, Poostchi Mohammadabadi M, Ersoy I, Powell A, Liang Z, Hossain M, Antani SK, Palaniappan K, Maude R, Thoma GR. Reducing the Diagnostic Burden of Malaria Using Microscopy Image Analysis and Machine Learning in the Field [Poster]. Annual Meeting of the American Society of Tropical Medicine & Hygiene (ASTMH), Atlanta, USA, 2016.
  • Rodriguez L, Morrison SM, Greenberg K, Demner-Fushman D. Towards Automatic Discovery of Genes Related to Human Placenta [Poster]. Poster Fall AMIA 2016.
  • Drake-Perez M, Smirniotopoulos J. Extraparenchymal Lesions in Adults. Neuroimaging Clin N Am. 2016 Nov;26(4):621-646. doi: 10.1016/j.nic.2016.06.009.
  • Guo P, Stanley RJ, De S, Long LR, Antani SK, Thoma GR, Demner-Fushman D, Sornapudia S. Features Advances to Automatically Find Images for Application to Clinical Decision Support. Medical Research Archives. 4(7) 2016. DOI: 10.18103/mra.v4i7.761

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