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Datta S, Rodriguez L, Shooshan SE, Demner-Fushman D, Roberts K.Understanding Spatial Language in Radiology: Representation Framework, Annotation, and Spatial Relation Extraction from Chest X-ray Reports using Deep Learning. Journal of Biomedical Informatics, 103473.
Demner-Fushman D, Mrabet Y, Ben Abacha A.Consumer health information and question answering: helping consumers find answers to their health-related information needs. Journal of the American Medical Informatics Association. Journal of the American Medical Informatics Association, 2020: 27 (2), 194-201.
Goodwin T, Demner-Fushman D.A customizable deep learning model for nosocomial risk prediction from critical care notes with indirect supervision. Journal of the American Medical Informatics Association, 2020: 27 (4), 567-576.
Sarrouti M, Ben Abacha A, Demner-Fushman D.Visual Question Generation from Radiology Images. Proceedings of the First Workshop on Advances in Language and Vision Research.
Voorhees EM, Alam T, Bedrick S, Demner-Fushman D, Hersh WR, Lo K, Roberts K, Soboroff I, Wang LL.TREC-COVID: Constructing a Pandemic Information Retrieval Test Collection. CoRR abs/2005.04474 (2020)
Zheng Q, Lu Y, Lure F, Jaeger S, Lu P.Clinical and radiological features of novel coronavirus pneumonia. Journal of X-Ray Science and Technology, vol. 28, no. 3, pp. 391-404, 2020.
Roberts K, Alam T, Bedrick S, Demner-Fushman D, Lo K, Soboroff I, Voorhees E, Wang LL, Hersh WR.TREC-COVID: Rationale and Structure of an Information Retrieval Shared Task for COVID-19. Journal of the American Medical Informatics Association, 2020.
Alzamzmi GA, Hsu L, Li W, Sachdev V, Antani SK.Echo Doppler Flow Classification and Goodness Assessment with Convolutional Neural Networks. 2019 18th IEEE International Conference On Machine Learning And Applications (ICMLA), Boca Raton, FL, USA, 2019, pp. 1744-1749, doi: 10.1109/ICMLA.2019.00283
Salekin S, Alzamzmi GA, Paul R, Goldgof D, Kasturi R, Ho T, Sun Y.Harnessing the Power of Deep Learning Methods in Healthcare: Neonatal Pain Assessment from Crying Sound.
Xue Z, Novetsky A, Einstein M, Marcus J, Befano B, Guo P, Demarco M, Wenzenten N, Long LR, Schiffman M, Antani SK.A demonstration of automated visual evaluation of cervical images taken with a smartphone camera. Int J Cancer . 2020 Apr 30
Ionescu B, Müller H, Péteri R, Dang-Nguyen DT, Zhou L, Piras L, Riegler M, Halvorsen P, Tran MT, Lux M, Gurrin C, Chamberlain J, Clark A, Campello A, de Herrera AGS, Ben Abacha A, Datla VV, Hasan SA, Liu J, Demner-Fushman D, Pelka O, Friedrich CM, Cid YD, Kozlovski S, Liauchuk V, Kovalev V, Berari P, Brie P, Fichou D, Dogariu M, Stefan L, Constantin M.ImageCLEF 2020: Multimedia Retrieval in Lifelogging, Medical, Nature, and Internet Applications. ImageCLEF 2020: Multimedia Retrieval in Lifelogging, Medical, Nature, and Internet Applications. ECIR (2) 2020: 533-541.
Rajaraman S, Kim I, Antani SK.Detection and visualization of abnormality in chest radiographs using modality-specific convolutional neural network ensembles. PeerJ 8:e8693 https://doi.org/10.7717/peerj.8693
Sornapudi S, Brown G, Xue Z, Long LR, Allen L, Antani SK.Comparing Deep Learning Models for Multi-cell Classification in Liquid- based Cervical Cytology Image. AMIA Annu Symp Proc. 2019; 2019: 820–827.
Guo P, Xue Z, Long LR, Antani SK.1. Anatomical landmark segmentation in uterine cervix images using deep learning. Proc. SPIE 11318, Medical Imaging 2020: Imaging Informatics for Healthcare, Research, and Applications, 1131810 (2 March 2020)
Zou J, Xue Z, Brown G, Long LR, Antani SK.Deep learning for nuclei segmentation and cell classification in cervical liquid based cytology. Proc. SPIE 11318, Medical Imaging 2020: Imaging Informatics for Healthcare, Research, and Applications, 1131811 (2 March 2020); doi: 10.1117/12.2549547
Yang F, Quizon N, Silamut K, Maude RJ, Jaeger S, Antani SK.Cascading YOLO: Automated Malaria Parasite Detection for Plasmodium Vivax in Thin Blood Smears. To be presented at SPIE Medical Imaging, Feb.18-20, 2020, Houston, USA.
Sarrouti M, Quatik EL, Alaoui S.SemBioNLQA: A semantic biomedical question answering system for retrieving exact and ideal answers to natural language questions. Artif Intell Med. 2020 Jan;102:101767. doi: 10.1016/j.artmed.2019.101767. Epub 2019 Nov 28.
Goodwin T, Demner-Fushman D.Deep Learning from Incomplete Data: Detecting Imminent Risk of Hospital-acquired Pneumonia in ICU Patients. Proceedings of the AMIA 2019 Annual Symposium, Washington, DC, USA, November 17-20, 2019.
Zeiss CJ, Donwook S, Vander Wyk B, Beck AP, Zatz N, Sneiderman CA, Kilicoglu H.Menagerie: A text-mining tool to support animal-human translation in neurodegeneration research. PLoS One. 2019 Dec 17;14(12):e0226176. doi: 10.1371/journal.pone.0226176. eCollection 2019.
Ben Abacha A, Hasan SA, Datls W, Liu J, Demner-Fushman D, Muller H.VQA-Med: Overview of the medical visual question answering task at imageclef 2019. CEUR Workshop Proceedings, 9-12, 2019.
Goodwin T, Demner-Fushman D, Fung K, Do P.Overview of the TAC 2019 Track on Drug-Drug Interaction Extraction from Drug Label. Proceedings of the Text Analysis Conference (TAC) 20 19, Gathersburg, MD, USA, November 12-13, 2019.
Mrabet Y, Demner-Fushman D.On Agreements in Visual Understanding. 2019 Conference on Neural Information Processing Systems. 2019 Conference on Neural Information Processing Systems, December 8-14, 2019. Vancouver, Canada.
Cheng P, Lu P, Wang P, Zhou W, Yu W, Jaeger S, Li J, Wu T, Ke X, Zheng B, Antani SK, Candemir S, Quan S, Lure F, Li H, Guo L.Applying Deep Learning and Radiomics to Determine Biological Lung and Heart Age from Chest Radiographs. Chinese Congress of Radiology.
Wang X, Guan Y, Lu P, Cheng G, Zhou W, Jaeger S, Zhen B, Antani SK, Yin X, Yu W, Guo L, Quan S, Lure F, Hurt D, Gabrielian A, Li H, Ke X.Screening of Tuberculosis in a TB High-burden Large Rural Region in China with Deep Learning Multi-modality Artificial Intelligence. Chinese Congress of Radiology.
Lu C, Payne A, Demner-Fushman D.Classification Types: A New Feature in the SPECIALIST Lexicon MIA 2019 Annual Symposium, Washington, DC, November 16-20, 2019.
Lu C, Aronson AR, Shooshan SE, Demner-Fushman D.Spell checker for consumer language (CSpell) Journal of the American Medical Informatics Association, Volume 26, Issue 3, 1 March 2019, Pages 211-218, https://doi.org/10.1093/jamia/ocy171 21 January 2019 (Editor's Choice)
Savery M, Huston M, Mork JG, Printseva O, Rae A, Schmidt S, Demner-Fushman D.Evaluation of System for Selective Indexing Classification. AMIA Fall Symposium, 2019.
Lure F, Jaeger S, Cheng G, Li H, Lu P, Yu W, Kung J, Guan Y.Applying Multi-modality Artificial Intelligence for Screening of Tuberculosis in a TB High-burden Large Rural Region in China TBScience, 50th Union World Conference on Lung Health, Hyderabad, India.