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  • Sarrouti M, Quatik EL, Alaoui S. SemBioNLQA: A semantic biomedical question answering system for retrieving exact and ideal answers to natural language questions. Artif Intell Med. 2020 Jan;102:101767. doi: 10.1016/j.artmed.2019.101767. Epub 2019 Nov 28.
  • Goodwin T, Demner-Fushman D. Deep Learning from Incomplete Data: Detecting Imminent Risk of Hospital-acquired Pneumonia in ICU Patients. Proceedings of the AMIA 2019 Annual Symposium, Washington, DC, USA, November 17-20, 2019.
  • Zeiss CJ, Donwook S, Vander Wyk B, Beck AP, Zatz N, Sneiderman CA, Kilicoglu H. Menagerie: A text-mining tool to support animal-human translation in neurodegeneration research. PLoS One. 2019 Dec 17;14(12):e0226176. doi: 10.1371/journal.pone.0226176. eCollection 2019.
  • Ben Abacha A, Hasan SA, Datls W, Liu J, Demner-Fushman D, Muller H. VQA-Med: Overview of the medical visual question answering task at imageclef 2019. CEUR Workshop Proceedings, 9-12, 2019.
  • Mrabet Y, Demner-Fushman D. On Agreements in Visual Understanding. 2019 Conference on Neural Information Processing Systems. 2019 Conference on Neural Information Processing Systems, December 8-14, 2019. Vancouver, Canada.
  • Rae A, Savery M, Mork JG, Demner-Fushman D. A High Recall Classifier for Selecting Articles for MEDLINE Indexing. AMIA Fall Symposium, 2019.
  • Demner-Fushman D, Mrabet Y, Ben Abacha A. Consumer health information and question answering: helping consumers find answers to their health-related information needs. JAMIA, 2019.
  • Rosemblat G, Fiszman, M, Shin D, Kilicoglu H. Towards a characterization of apparent contradictions in the biomedical literature using context analysis. Journal of Biomedical Informatics. 2019. In Press. https://doi.org/10.1016/j.jbi.2019.103275.
  • Ben Abacha A, Mrabet Y, Sharp M, Goodwin T, Shooshan S, Demner-Fushman D. Bridging the Gap Between Consumers’ Medication Questions and Trusted Answers. Stud Health Technol Inform. 2019 Aug 21;264:25-29. doi: 10.3233/SHTI190176.
  • Vasilakes J, Fan Y, Rizvi R, Bompelli A, Bodenreider O, Zhang R. Normalizing Dietary Supplement Product Names Using the RxNorm Model. Stud Health Technol Inform. 2019 Aug 21;264:408-412. doi: 10.3233/SHTI190253.
  • Divita G, Rosemblat G, Browne AC. Building a medical Spanish lexicon. AMIA Annu Symp Proc. 2007 Oct 11:941.
  • Ben Abacha A, Shivade C, Demner-Fushman D. Overview of the MEDIQA 2019 Shared Task on Textual Inference, Question Entailment and Question Answering. Proceedings of the 18th BioNLP Workshop and Shared Task, Florence, Italy, August 1, 2019.
  • Ben Abacha A, Shivade C, Demner-Fushman D. Overview of the MEDIQA 2019 Shared Task on Textual Inference, Question Entailment and Question Answering. Proceedings of the BioNLP 2019 workshop.
  • Demner-Fushman D, Cohen KB, Ananiadou S, Tsujii J. Sesame Street at BioNLP 2019. Proceedings of the BioNLP 2019 workshop.
  • Ben Abacha A, Demner-Fushman D. On the Summarization of Consumer Health Questions. Proceedings of the 57th Annual Meeting of the Association for Computational Linguistics, Florence, Italy 2019.
  • Allam A, Magy M, Thoma G, Krauthammer M. Neural networks versus Logistic regression for 30 days all-cause readmission prediction. Sci Rep. 2019 Jun 26;9(1):9277. doi: 10.1038/s41598-019-45685-z.
  • Chowdhuri S, McCrea S, Demner-Fushman D, Overby TC. Extracting Biomedical Terms from Postpartum Depression Online Health Communities. AMIA Jt Summits Transl Sci Proc. 2019 May 6;2019:592-601.
  • Zhang XA, Yates A, Vasilevsky N, Gourdine JP, Callahan TJ, Carmody LC, Danis D, Joachimiak MP, Ravanmehr V, Pfaff ER, Champion J, Robasky K, Xu H, Fecho K, Walton NA, Zhu RL, Ramsdill J, Mungall CJ, Kohler S, Haendel MA, McDonald CJ, Vreeman DJ, Peden DB, Bennett TD, Feinstein JA, Martin B, Stefanski AL, Hunter LE, Chute CG, Robinson PN. Semantic integration of clinical laboratory tests from electronic health records for deep phenotyping and biomarker discovery. NPJ Digit Med. 2019;2. pii: 32. doi: 10.1038/s41746-019-0110-4. Epub 2019 May 2.
  • Ben Abacha A, Demner-Fushman D. On the Role of Question Summarization and Information Source Restriction in Consumer Health Question Answering. Proceedings of the AMIA 2019 Informatics Summit, San Francisco, CA, USA, March 25-28, 2019.
  • Zolnoori M, Fung K, Patrick DB, Fontelo P, Kharrazi H, Faiola A, Shah ND, Shirley WYS, Eldredge CE, Luo J, Conway M, Zhu J, Park SK, Xu K, Moayyed H. The PsyTAR dataset: From patients generated narratives to a corpus of adverse drug events and effectiveness of psychiatric medications. Data Brief. 2019 Mar 15;24:103838. doi: 10.1016/j.dib.2019.103838. eCollection 2019 Jun.
  • Kilicoglu H, Peng Z, Tafreshi S, Tran T, Rosemblat G, Schneider J. Confirm or Refute?: A Comparative Study on Citation Sentiment Classification in Clinical Research Publications. J Biomed Inform. 2019 Feb 9:103123. doi: 10.1016/j.jbi.2019.103123.
  • Ben Abacha A, Demner-Fushman D. On the role of question summarization and information source restriction in consumer health question answering. In Proceedings of the AMIA 2019 Informatics Summit, San Francisco, CA, USA, 2019.
  • Zolnoori M, Fung K, Patrick TB, Fontelo P, Kharrazi H, Faiola A, Wu YSS, Eldredge CE, Luo J, Conway M, Zhu J, Park SK, Xu K, Moayyed H, Goudarzvand S. A systematic approach for developing a corpus of patient reported adverse drug events: A case study for SSRI and SNRI medications. NCBINCBI Logo Skip to main content Skip to navigation Resources How To About NCBI Accesskeys PubMed US National Library of Medicine National Institutes of Health Search databaseSearch term 30611893[uid] Clear inputSearch Create RSSCreate alertAdvancedHelp Result Filters Format: AbstractSend to J Biomed Inform. 2019 Feb;90:103091. doi: 10.1016/j.jbi.2018.12.005. Epub 2019 Jan 4.
  • Lu C, Aronson, AR, Shooshan SE, Demner-Fushman D. Spell checker for consumer language (CSpell). J Am Med Inform Assoc. 2019 Jan 21. doi: 10.1093/jamia/ocy171. [Epub ahead of print]
  • Scarton LA, Wang L, Kilicoglu H, Jahries M, Del Fiol M. Expanding vocabularies for complementary and alternative medicine therapies. Int J Med Inform. 2019 Jan;121:64-74. doi: 10.1016/j.ijmedinf.2018.11.009. Epub 2018 Nov 22.

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