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Investigating the lexico-syntactic properties of phenotype terms – Application to interoperability between HPO and SNOMED CT.

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Proc Joint Bio-Ontologies and BioLINK ISMB'2015 SIG session "Phenotype Day" 2015:8-11.
Abstract: 

Objective: To investigate the lexico-syntactic properties of clinical phenotype terms in order to identify partial lexical mappings between HPO and SNOMED CT. Methods: We identify modifiers HPO terms and attempt to map demodified terms to SNOMED CT through UMLS. Results: We identified partial mappings to SNOMED CT for 20% of HPO concepts with no complete mapping to SNOMED CT. Conclusions: Through complete and partial mappings, 50% of the HPO concepts can be mapped to SNOMED CT.

Dhombres F, Bodenreider O. Investigating the lexico-syntactic properties of phenotype terms – Application to interoperability between HPO and SNOMED CT. Proc Joint Bio-Ontologies and BioLINK ISMB'2015 SIG session "Phenotype Day" 2015:8-11.