PUBLICATIONS & PRESENTATIONS
Medical Ontology Research - Drug-related Publications
2019
- Bodenreider O, Nikiema J-N.
Comparing the representation
of medicinal products in RxNorm and SNOMED CT – Consequences on interoperability.
[abstract]
SNOMED CT Expo 2019:(https://confluence.ihtsdotools.org/pages/viewpage.action?pageId=87042679).
[download PDF]
- Kho SJ, Sheth A, Bodenreider O.
Automatic identification
of individual drugs in death certificates.
Stud Health Technol Inform (Proc
Medinfo) 2019;21(264):183-187.
[download
PDF] [PubMed: 31437910]
- Nikiema J-N, Bodenreider O.
Comparing the representation
of medicinal products in RxNorm and SNOMED CT – Consequences on interoperability.
Proceedings of the 10th International Conference on Biomedical Ontology (ICBO 2019)
2019:(electronic proceedings:
https://drive.google.com/file/d/1ZTDH-vWUvCqBCyOPY5f97L6L7fb4HRWA/).
[download
PDF]
- Vasilakes J, Fan Y, Rizvi R, Bompelli A, Zhang R, Bodenreider O.
Normalizing dietary supplement product names using the RxNorm model.
Stud Health Technol Inform (Proc Medinfo) 2019;21(264):408-412.
[download
PDF] [PubMed: 31437955] [PubMedCentral: PMC6792000]
2018
- Bodenreider O, Cornet R, Vreeman DJ.
Recent developments
in clinical terminologies – SNOMED CT, LOINC and RxNorm.
Yearb Med
Inform 2018;27(1):129-139.
[download
PDF] [PubMed: 30157516] [PubMedCentral: PMC6115234]
- Bodenreider O, James J.
The new SNOMED CT international
medicinal product model.
Proceedings of the 7th International Conference on
Biomedical Ontology (ICBO 2018) 2018:(electronic proceedings:
http://ceur-ws.org/Vol-2285/ICBO_2018_paper_36.pdf).
[download
PDF]
- Bodenreider O, Peters LB.
Using RxNav for drug analytics
– How to interpret obsolete drug identifiers? [demo]
AMIA Annu
Symp Proc 2018:2229.
[download
PDF]
- Pedersen JG, Gardner B, Campbell JR, Campbell WS, Geary C, Peters L, Bodenreider O,
McClay JC.
Historically comprehensive medications metadata for i2b2 data
warehouses. [abstract]
AMIA Annu Symp Proc 2018:1806-1807.
[download
PDF]
- Peters LB, Rice R, Bodenreider O.
RxNav-in-a-Box –
A locally-installable version of RxNav and related APIs. [poster]
AMIA Annu Symp Proc 2018:2102.
[download PDF]
2017
- Bahr NJ, Nelson SD, Winnenburg R, Bodenreider O.
Eliciting the intension of drug value sets – Principles and quality assurance
applications.
Stud Health Technol Inform (Proc Medinfo) 2017:843-847.
[download PDF] [PubMed:
29295218] [PubMedCentral:
PMC5881398]
- Bodenreider O, Peters LB.
RxNorm concept history
service. [poster]
AMIA Annu Symp Proc 2017:1955.
[download PDF]
- Bodenreider O, Peters LB.
RxMix – Use of NLM drug
APIs by non-programmers. [demo]
AMIA Annu Symp Proc 2017:2291.
[download PDF]
- Fung KW, Kapusnik-Uner JE, Cunningham J, Higby-Baker S, Bodenreider O.
Comparison of three commercial knowledge bases for detection of drug-drug interactions in
clinical decision support.
J Am Med Inform Assoc 2017;24(4):806-812.
[download PDF] [PubMed:
28339701] [PubMedCentral:
PMC6080681]
- Kury FSP, Bodenreider O.
Mapping U.S. FDA National Drug
Codes to Anatomical-Therapeutic-Chemical classes using RxNorm. [poster]
AMIA Annu Symp Proc 2017:2070.
[download PDF]
- Nelson SD, Parker J, Lario R, Winnenburg R, Erlbaum MS, Lincoln MJ, Bodenreider
O.
Interoperability of medication classification systems: Lessons
learned mapping established pharmacologic classes (EPCs) to SNOMED CT.
Stud
Health Technol Inform (Proc Medinfo) 2017:920-924.
[download PDF] [PubMed:
29295234] [PubMedCentral:
PMC5881380]
- Peters LB, Bodenreider O.
RxNav 2.0 – A web-based,
mobile-responsive RxNorm browser. [poster]
AMIA Annu Symp Proc
2017:2143.
[download
PDF]
- Peters LB, Nguyen T, Bodenreider O.
Terminology status
APIs – Mapping obsolete codes to current RxNorm, SNOMED CT and LOINC concepts.
[poster]
Stud Health Technol Inform (Proc Medinfo) 2017:1333.
[download
PDF] [PubMed: 29295414] [PubMedCentral: PMC5875440]
2016
- Bodenreider O.
Leveraging RxNorm and drug
classifications for analyzing prescription datasets. [abstract]
Symposium on "Chemistry, Data, & the Semantic Web: An Important Triple to Advance
Science” at the 251st American Chemical Society National Meeting & Exposition 2016:(no proceedings).
[download
PDF]
- Dhombres F, Bodenreider O.
Assessing the potential risk
in drug prescriptions during pregnancy. [abstract]
AMIA Annu Symp
Proc 2016:45-46.
[download
PDF]
- Homer ML, Palmer NP, Bodenreider O, Cami A, Chadwick L, Mandl KD.
The drug data to knowledge pipeline: Large-scale claims data classification for pharmacologic
insight.
AMIA Jt Summits Transl Sci Proc 2016;CRI:105-110.
[download
PDF] [PubMed: 27570659] [PubMedCentral: PMC5001754]
- Kury FSP, Bodenreider O.
Desiderata for drug
classification systems for their use in analyzing large drug prescription datasets.
Proceedings of the 3rd Workshop on Data Mining for Medical Informatics (DMMI 2016)
2016.
[download PDF]
- Peters LB, Bodenreider O.
NDC properties in RxNorm.
[poster]
AMIA Annu Symp Proc 2016:1551.
[download PDF]
2015
- Bodenreider O, Peters LB, Nguyen T.
Navigating between
drug classes and RxNorm drugs with RxClass. [demo]
AMIA Annu Symp
Proc 2015:2132.
[download
PDF]
- Nguyen T, Peters LB, Bodenreider O.
Finding similar drug
classes using RxClass. [poster]
AMIA Annu Symp Proc 2015:1615.
[download PDF]
- Peters LB, Bahr N, Bodenreider O.
Evaluating drug-drug
interaction information in NDF-RT and DrugBank.
J Biomed Semantics
2015;6(19).
[download PDF] [PubMed:
25964850] [PubMedCentral:
PMC4426554]
- Peters LB, Bodenreider O.
Approaches to supporting the
analysis of historical medication datasets with RxNorm.
AMIA Annu Symp
Proc 2015:1034-1041.
[download
PDF] [PubMed: 26958241] [PubMedCentral: PMC4765580]
- Winnenburg R, Mortensen J, Bodenreider O.
Using
description logics to evaluate the consistency of drug-class membership relations in NDF-RT.
J Biomed Semantics 2015;6(13).
[download PDF] [PubMed:
25866612] [PubMedCentral:
PMC4392727]
- Winnenburg R, Sorbello A, Bodenreider O.
Exploring
adverse drug events at the class level.
J Biomed Semantics 2015;6(18).
[download PDF] [PubMed:
25937884] [PubMedCentral:
PMC4416343]
2014
- Bodenreider O, Peters LB, Nguyen T.
RxClass –
Navigating between Drug Classes and RxNorm Drugs. [demo]
Proceedings
of the 5th International Conference on Biomedical Ontology 2014:106-107
(electronic proceedings: http://ceur-ws.org/Vol-1327/).
[download
PDF]
- Bodenreider O, Rodriguez LM.
Analyzing U.S. prescription
lists with RxNorm and the ATC/DDD Index.
AMIA Annu Symp Proc 2014:297-306.
[download PDF] [PubMed:
25954332] [PubMedCentral:
PMC4419961]
- Nguyen T, Peters LB, Bodenreider O.
RxClass - Navigating
between drug classes and RxNorm drugs. [poster]
AMIA Annu Symp
Proc 2014:1529.
[download
PDF]
- Rodriguez LM, Huser V, Bodenreider O, Cimino JJ.
Automatic coding of free-text medication data recorded by research coordinators.
[poster]
AMIA Annu Symp Proc 2014:1565.
[download PDF]
- Winnenburg R, Bodenreider O.
A framework for assessing
the consistency of pharmacological classes across sources.
J Biomed
Semantics 2014;5(30).
[download
PDF] [PubMed: 25101165] [PubMedCentral: PMC4120719]
- Winnenburg R, Bodenreider O.
Evaluating the consistency
of inferred drug-class membership relations in NDF-RT.
Proceedings of the
17th ISMB'2014 SIG meeting "Bio-Ontologies" 2014:(electronic proceedings:
https://drive.google.com/file/d/0B6AZUdKw1IVHeGVtTVZCRXJhbFk/).
[download
PDF]
2013
- Peters LB, Mortensen J, Nguyen T, Bodenreider O.
Enabling complex queries to drug information sources through functional
composition.
Stud Health Technol Inform (Proc Medinfo) 2013;192:692-696.
[download
PDF] [PubMed: 23920645] [PubMedCentral: PMC4303373]
- Peters LB, Nguyen T, Bodenreider O.
Displaying drug
classes in RxNav. [poster]
AMIA Annu Symp Proc 2013:1134.
[download PDF]
- Winnenburg R, Rodriguez LM, Callaghan F, Sorbello A, Szarfman A, Bodenreider
O.
Aligning pharmacologic classes between MeSH and ATC.
Proceedings of the International Workshop on Vaccine and Drug Ontology Studies (VDOS
2013) 2013:(electronic proceedings:
http://www2.unb.ca/csas/data/ws/semantic-trilogy-workshops/papers/ICBO-Workshops.pdf).
[download
PDF]
2012
- Peters LB, Nguyen T, Bodenreider O.
RxBatch –
Batch operations for RxNorm and NDF-RT APIs. [poster]
AMIA Annu Symp
Proc 2012:1897.
[download
PDF]
- Winnenburg R, Bodenreider O.
Mapping drug entities
between the European and American standards, ATC and RxNorm. [poster]
Poster Proceedings of the Eighth International Conference on Data Integration in the Life
Sciences (DILS 2012) 2012:22.
[download
PDF]
2011
- Bodenreider O, Peters LB, Nguyen T.
RxNav: Browser and
application programming interfaces for drug information sources. [demo]
AMIA Annu Symp Proc 2011:2129.
[download PDF]
- Peters LB, Kapusnik-Uner JE, Nguyen T, Bodenreider O.
An
approximate matching method for clinical drug names.
AMIA Annu Symp
Proc 2011:1117-1126.
[download
PDF] [PubMed: 22195172] [PubMedCentral: PMC3243188]
- Peters LB, Nguyen T, Bodenreider O.
An application
programming interface for NDF-RT. [poster]
AMIA Annu Symp Proc
2011:1922.
[download
PDF]
2010
2009
- Bodenreider O, Peters LB.
A graph-based approach to
auditing RxNorm.
Journal of Biomedical Informatics 2009;42(3):558-570.
[download PDF] [PubMed:
19394440] [PubMedCentral:
PMC2722378]
- Pathak J, Peters LB, Chute CG, Bodenreider O.
Comparing
and evaluating terminology services APIs: RxNav, UMLSKS, and LexBIG. [abstract]
AMIA Annu Symp Proc 2009:515.
[download
PDF]
2008
2007
- Zeng K, Bodenreider O, Kilbourne JT, Nelson SJ.
RxNav:
Towards an integrated view on drug information. [poster]
Medinfo 2007:P386.
[download
PDF]
- Zeng K, Bodenreider O, Kilbourne JT, Nelson SJ.
RxNav:
An integrated view on drug information. [demo]
AMIA Annu Symp
Proc 2007:1202.
[download
PDF]
2006
2005
2004
- Bodenreider O, Nelson SJ.
RxNav: A semantic navigation
tool for clinical drugs. [poster]
Medinfo 2004:1530.
[download
PDF]