A B C D E F G H I J K L M N O P Q R S T U V W Y Z

S

SaveAsOperation(JFrame, VttObj) - Static method in class gov.nih.nlm.nls.vtt.Operations.FileOperations

Save a VTT file to a specified file name operations.

SaveFile(File, ConfigObj) - Static method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Save configObj to file.

SaveFile(File, VttDocument, int, VttObj) - Static method in class gov.nih.nlm.nls.vtt.Model.VttDocument

Save vttDocument to a file.

SaveInfo - Class in gov.nih.nlm.nls.vtt.Model

This is the Save Information Java object class.

SaveInfo() - Constructor for class gov.nih.nlm.nls.vtt.Model.SaveInfo

Create a SaveInfo Java object with default values.

SaveInfo(SaveInfo) - Constructor for class gov.nih.nlm.nls.vtt.Model.SaveInfo

Create a SaveInfo Java object by specifying a tag.

SaveInfo(String, String, String) - Constructor for class gov.nih.nlm.nls.vtt.Model.SaveInfo

Create a SaveInfo Java object by specifying vtt file version, user name, and data time stamp.

SaveMarkupsToFile(String) - Method in class gov.nih.nlm.nls.vtt.Model.Markups

save markups to file.

SaveOperation(JFrame, VttObj) - Static method in class gov.nih.nlm.nls.vtt.Operations.FileOperations

Save a VTT file operations.

SaveTagsToFile(String, Vector<Tag>) - Static method in class gov.nih.nlm.nls.vtt.Model.Tags

Save tags to a specified file.

SELECT_BACKGROUND_COLOR_B - Static variable in class gov.nih.nlm.nls.vtt.Model.Configuration

key for the select markup style: background color: blue

SELECT_BACKGROUND_COLOR_G - Static variable in class gov.nih.nlm.nls.vtt.Model.Configuration

key for the select markup style: background color: green

SELECT_BACKGROUND_COLOR_R - Static variable in class gov.nih.nlm.nls.vtt.Model.Configuration

key for the select markup style: background color: red

SELECT_BOLD - Static variable in class gov.nih.nlm.nls.vtt.Model.Configuration

key for the select markup style: bold

SELECT_FONT - Static variable in class gov.nih.nlm.nls.vtt.Model.Configuration

key for the select markup style: font

SELECT_ITALIC - Static variable in class gov.nih.nlm.nls.vtt.Model.Configuration

key for the select markup style: italic

SELECT_SIZE - Static variable in class gov.nih.nlm.nls.vtt.Model.Configuration

key for the select markup style: size

SELECT_TEXT_COLOR_B - Static variable in class gov.nih.nlm.nls.vtt.Model.Configuration

key for the select markup style: text color: blue

SELECT_TEXT_COLOR_G - Static variable in class gov.nih.nlm.nls.vtt.Model.Configuration

key for the select markup style: text color: green

SELECT_TEXT_COLOR_R - Static variable in class gov.nih.nlm.nls.vtt.Model.Configuration

key for the select markup style: text color: red

SELECT_UNDERLINE - Static variable in class gov.nih.nlm.nls.vtt.Model.Configuration

key for the select markup style: underline

SelectControl - Class in gov.nih.nlm.nls.vtt.GuiControl

This is the Java class controls selected text and selected markup by mimiking left mouse click (from listen to caret update of CaretListener).

SelectControl(VttObj) - Constructor for class gov.nih.nlm.nls.vtt.GuiControl.SelectControl

Create a SelectControl object for VTT selection controller by specifying vttObj.

SelectOperations - Class in gov.nih.nlm.nls.vtt.Operations

This class provides methods for GUI selected related operations.

SEP_STR - Static variable in class gov.nih.nlm.nls.vtt.Lib.DiffUtil

separate string

SEPARATOR_STR - Static variable in class gov.nih.nlm.nls.vtt.Model.VttDocument

separate string in the header

Set(VttObj, Tag, int) - Static method in class gov.nih.nlm.nls.vtt.Operations.TagOperations

Set the properties of indexed tag to a new tag

SetAction(int) - Method in class gov.nih.nlm.nls.vtt.Model.UndoBase

Set action.

SetAction(int) - Method in class gov.nih.nlm.nls.vtt.Model.UndoNode

Set the action.

SetAdded(int) - Method in class gov.nih.nlm.nls.vtt.Lib.Difference

Set the Added line.

SetAnnotation(String) - Method in class gov.nih.nlm.nls.vtt.Model.Markup

Set the annotation.

SetBackground(Color) - Method in class gov.nih.nlm.nls.vtt.Model.Tag

Set the background color in the font style

SetBaseFontSize(int) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: the base font size.

SetBold(boolean) - Method in class gov.nih.nlm.nls.vtt.Model.Tag

Set the bold in the font style

SetCaretPosition(int) - Method in class gov.nih.nlm.nls.vtt.Gui.MainPanel

Set VTT caret position.

SetCategory(String) - Method in class gov.nih.nlm.nls.vtt.Model.Tag

Set the category

SetCategoryList(Vector<String>) - Method in class gov.nih.nlm.nls.vtt.Model.TagNameCategoryList

Set category list

SetCategoryList(Vector<TagFilter>) - Method in class gov.nih.nlm.nls.vtt.Model.Tags

Set category list.

SetConfig(ConfigObj, VttObj) - Static method in class gov.nih.nlm.nls.vtt.Operations.ConfigOptionsOperations

Set the configuration by specifying configObj Java object.

SetConfirmation(boolean) - Method in class gov.nih.nlm.nls.vtt.Model.MetaData

Set the flag of confirmation.

SetCur(Markup) - Method in class gov.nih.nlm.nls.vtt.Model.UndoBase

Set current markup.

SetDateTime(String) - Method in class gov.nih.nlm.nls.vtt.Model.SaveInfo

Set the date time stamp

SetDeleted(int) - Method in class gov.nih.nlm.nls.vtt.Lib.Difference

Set the deletion line.

SetDisplay(boolean) - Method in class gov.nih.nlm.nls.vtt.Model.Tag

Set the display

SetDocDir(File) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: VTT documents directory.

SetDocFile(File) - Method in class gov.nih.nlm.nls.vtt.Model.VttObj

Set Vtt document file.

SetEndSelectMarkup(boolean, VttObj) - Static method in class gov.nih.nlm.nls.vtt.Operations.MarkupOperations

Set the select index to the end of displayable markups (end).

SetFilePathDisplayLength(int) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: the display length of file path.

SetFocusAt(int) - Static method in class gov.nih.nlm.nls.vtt.Api.VttApi

Set focus at the specified VTT window by index.

SetFontFamily(String) - Method in class gov.nih.nlm.nls.vtt.Model.Tag

Set the name of font family

SetFontSize(String) - Method in class gov.nih.nlm.nls.vtt.Model.Tag

Set the size of font

SetForeground(Color) - Method in class gov.nih.nlm.nls.vtt.Model.Tag

Set the foreground color in font style

SetHelpDoc(DocHtmlBrowser) - Method in class gov.nih.nlm.nls.vtt.Model.VttGui

Set Vtt help document.

SetHighlight(VttObj, Markup) - Static method in class gov.nih.nlm.nls.vtt.Operations.SelectOperations

Set high light by the specified markup.

SetHighlight(VttObj, int, int) - Static method in class gov.nih.nlm.nls.vtt.Operations.SelectOperations

Set high light by the specified start and end position.

SetHighlightBackgroundColor(VttObj) - Static method in class gov.nih.nlm.nls.vtt.Operations.TextDisplayOperations

Set the color of highlight background.

SetHighlightColors(Color, Color) - Method in class gov.nih.nlm.nls.vtt.Gui.MainPanel

Set highlight color of text panel.

SetHighlightColors(VttObj) - Static method in class gov.nih.nlm.nls.vtt.Operations.TextDisplayOperations

Set the color of highlight.

SetHighlightColors(VttObj, MainFrame) - Static method in class gov.nih.nlm.nls.vtt.Operations.TextDisplayOperations

Set the color of highlight.

SetHighlightEnd(int) - Method in class gov.nih.nlm.nls.vtt.Model.VttGui

Set the end position of highlight.

SetHighlightStart(int) - Method in class gov.nih.nlm.nls.vtt.Model.VttGui

Set the start position of highlight.

SetHighlightTextColor(VttObj) - Static method in class gov.nih.nlm.nls.vtt.Operations.TextDisplayOperations

Set the color of highlight text.

SetHome(String) - Method in class gov.nih.nlm.nls.vtt.GuiLib.DocHtmlBrowser

Set the home in DocHtmlBrowser.

SetHomeSelectMarkup(boolean, VttObj) - Static method in class gov.nih.nlm.nls.vtt.Operations.MarkupOperations

Set the select markup to the beginning of displayable markups (home).

SetItalic(boolean) - Method in class gov.nih.nlm.nls.vtt.Model.Tag

Set the italic in the font style

SetLength(int) - Method in class gov.nih.nlm.nls.vtt.Model.Markup

Set the length.

SetLengthSize(int) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: the size of field for length.

SetLineNum(int) - Method in class gov.nih.nlm.nls.vtt.Lib.DiffStats

Set the line number

SetLineWrap(boolean) - Method in class gov.nih.nlm.nls.vtt.GuiLib.LineWrapableTextPane

Set line wrap option to the specify value.

SetMainFrame(MainFrame) - Method in class gov.nih.nlm.nls.vtt.Model.VttGui

Set Vtt main frame.

SetMarkupAt(Markup, int) - Method in class gov.nih.nlm.nls.vtt.Model.Markups

Set markup at specified position.

SetMarkups(Markups) - Method in class gov.nih.nlm.nls.vtt.Model.VttDocument

Set the markups list to Vtt document.

SetName(String) - Method in class gov.nih.nlm.nls.vtt.Model.Tag

Set the name

SetName(String) - Method in class gov.nih.nlm.nls.vtt.Model.TagFilter

Set the tag name for Tag Filter

SetName(String) - Method in class gov.nih.nlm.nls.vtt.Model.TagNameCategoryList

Set name of tag name category list

SetNameList(Vector<TagFilter>) - Method in class gov.nih.nlm.nls.vtt.Model.Tags

Set name list.

SetOffset(int) - Method in class gov.nih.nlm.nls.vtt.Model.Markup

Set the offset.

SetOffsetSize(int) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: the size of field for offset.

SetOverlap(boolean) - Method in class gov.nih.nlm.nls.vtt.Model.VttGui

Set the Vtt overlap mode.

SetOverwriteSelectBackgroundColor(boolean) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: the boolean flag of overwriting background color on select markup.

SetOverwriteSelectBold(boolean) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: the boolean flag of overwriting bold on select markup.

SetOverwriteSelectFont(boolean) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: the boolean flag of overwriting font on select markup.

SetOverwriteSelectItalic(boolean) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: the boolean flag of overwriting italic on select markup.

SetOverwriteSelectSize(boolean) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: the boolean flag of overwriting size on select markup.

SetOverwriteSelectTextColor(boolean) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: the boolean flag of overwriting text color on select markup.

SetOverwriteSelectUnderline(boolean) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: the boolean flag of overwriting underline on select markup.

SetOwner(JFrame) - Static method in class gov.nih.nlm.nls.vtt.GuiControl.WindowControl

Set the owner.

SetPage(String) - Method in class gov.nih.nlm.nls.vtt.GuiLib.DocHtmlBrowser

Set the browsing page in DocHtmlBrowser by specifying url.

SetPosSize(GridBagConstraints, int, int, int, int) - Static method in class gov.nih.nlm.nls.vtt.GuiLib.GridBag

Set position and size to GridBagConstraints.

SetPrev(Markup) - Method in class gov.nih.nlm.nls.vtt.Model.UndoBase

Set previous markup.

SetQucikKeyMappingAt(String, int) - Method in class gov.nih.nlm.nls.vtt.Model.Tags

Set quick key mapping of tags with specified name category at the specified index.

SetQuickKeyMappings(Vector<String>) - Method in class gov.nih.nlm.nls.vtt.Model.Tags

Set quick key mapping of tags.

SetQuickKeyMappingsToDefault() - Method in class gov.nih.nlm.nls.vtt.Model.Tags

Set quick key mapping to default (same order as the order of tags list).

SetReservedTag(Tag) - Method in class gov.nih.nlm.nls.vtt.Model.VttDocument

set reserve tag to a specified tag

SetSaveInfo(SaveInfo) - Method in class gov.nih.nlm.nls.vtt.Model.SaveInfo

Set saveInfo to a specified saveInfo

SetSelectIndex(int) - Method in class gov.nih.nlm.nls.vtt.Model.Markups

Set the selected index.

SetSelectMarkup(Markup) - Method in class gov.nih.nlm.nls.vtt.Model.Markups

Set a markup to the selected markup on markups list.

SetSelectMarkup(int, VttObj) - Static method in class gov.nih.nlm.nls.vtt.Operations.MarkupOperations

Set selected Markup by left mouse click (current position of caret)

SetSelectMarkupTag(Tag) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: the tag for the selected markup

SetStatus(boolean) - Method in class gov.nih.nlm.nls.vtt.Model.TagFilter

Set the filter status

SetStyleConstants(Tag, int, int) - Static method in class gov.nih.nlm.nls.vtt.Model.VttDocument

Set style constant by specifying tag, base font size, and zoom factor.

SetStyleConstants(Tag, int) - Static method in class gov.nih.nlm.nls.vtt.Model.VttDocument

Set style constants by specifying tag and font size.

SetTag(Tag) - Method in class gov.nih.nlm.nls.vtt.Model.Tag

Set tag to a specified tag

SetTagAt(int, Tag, boolean) - Method in class gov.nih.nlm.nls.vtt.Model.Tags

Set the tag at the specified position with specifying tag and update flag.

SetTagCategory(String) - Method in class gov.nih.nlm.nls.vtt.Model.Markup

Set the category of applied tag.

SetTagCategorySize(int) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: the size of field for tag category.

SetTagFile(File) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: VTT Tag file.

SetTagIndex(int) - Method in class gov.nih.nlm.nls.vtt.Gui.TagsDialog

Set the index of interested tag.

SetTagName(String) - Method in class gov.nih.nlm.nls.vtt.Model.Markup

Set the name of applied tag.

SetTagNameSize(int) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: the size of field for tag name.

SetTags(Tags) - Method in class gov.nih.nlm.nls.vtt.Model.VttDocument

Set the tags list to Vtt document.

SetTagsFile(String) - Method in class gov.nih.nlm.nls.vtt.Model.MetaData

Set default tags file.

SetText(String) - Method in class gov.nih.nlm.nls.vtt.Gui.StatusPanel

Set the text of information.

SetText(String) - Method in class gov.nih.nlm.nls.vtt.Model.VttDocument

Set the text to Vtt document.

SetTextMenuToDefault() - Method in class gov.nih.nlm.nls.vtt.Gui.VttMenuBar

Set text menu to the default setting.

SetTextStyleByMarkupTag(DefaultStyledDocument, Markup, Tag, int, int) - Static method in class gov.nih.nlm.nls.vtt.Model.VttDocument

Set text style base on current markup-tag for the text in the markup range change.

SetTextToDefault(VttObj) - Static method in class gov.nih.nlm.nls.vtt.Operations.TextDisplayOperations

Set text style to default (reserved tag).

SetToTextDefault() - Method in class gov.nih.nlm.nls.vtt.Model.Tag

Set bold, italic, underline, display, font, size to default

SetUnderline(boolean) - Method in class gov.nih.nlm.nls.vtt.Model.Tag

Set the underline in the font style

SetUpdateStateChange(boolean) - Method in class gov.nih.nlm.nls.vtt.GuiControl.MetaDataDialogControl

Set the flag of updating changed state.

SetUpdateStateChange(boolean) - Method in class gov.nih.nlm.nls.vtt.GuiControl.TagsDialogControl

Set the flag of updating changed state.

SetupFontSize(JFrame, VttObj) - Static method in class gov.nih.nlm.nls.vtt.Operations.TextDisplayOperations

Set font size to default.

SetUseCaretUpdateByMouse(boolean) - Method in class gov.nih.nlm.nls.vtt.Gui.MainPanel

Set the boolean flag of using mouse to update VTT caret position.

SetUserName(String) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: VTT user name.

SetUserName(String) - Method in class gov.nih.nlm.nls.vtt.Model.SaveInfo

Set the user name

SetUseTextTagForNotDisplaySelectMarkup(boolean) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: the boolean flag of use text tag for not display select markup.

SetVarsFromConfig(Configuration) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables by specifying a Configuration object.

SetVarsFromConfigObj(ConfigObj) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables by specifying a ConfigObj object.

SetVttDir(String) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: VTT top directory.

SetVttFileVersion(String) - Method in class gov.nih.nlm.nls.vtt.Model.SaveInfo

Set the VTT file format version

SetVttFormat(int) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: VTT format.

SetWeight(GridBagConstraints, int, int) - Static method in class gov.nih.nlm.nls.vtt.GuiLib.GridBag

Set weight to GridBagConstraints for resizing.

SetZoomFactor(int) - Method in class gov.nih.nlm.nls.vtt.Model.ConfigObj

Set configuration variables: the zoom in/out factor.

Show(Window, VttObj) - Method in class gov.nih.nlm.nls.vtt.Gui.AddTagDialog

Set AddTagDialog to be visible (show).

Show(Window, VttObj) - Method in class gov.nih.nlm.nls.vtt.Gui.ConfigOptionsDialog

Set ConfigOptionsDialog to be visible (show).

Show() - Method in class gov.nih.nlm.nls.vtt.Gui.DiffDialog

Set DiffDialog to be visible (show).

Show(Window, int, VttObj) - Method in class gov.nih.nlm.nls.vtt.Gui.EditTagDialog

Set EditTagDialog to be visible (show).

Show(Window, VttObj) - Method in class gov.nih.nlm.nls.vtt.Gui.FindDialog

Set this dialog to be visible (show).

Show(VttObj) - Method in class gov.nih.nlm.nls.vtt.Gui.MarkupDialog

Set this dialog to be visible (show).

Show(Window, int, VttObj) - Method in class gov.nih.nlm.nls.vtt.Gui.MarkupsDialog

Set this dialog to be visible (show).

Show(Window, VttObj) - Method in class gov.nih.nlm.nls.vtt.Gui.MarkupsDialog

Set this dialog to be visible (show).

Show(Window, int, VttObj) - Method in class gov.nih.nlm.nls.vtt.Gui.MetaDataDialog

Set MetaDataDialog to be visible (show).

Show(Window, VttObj) - Method in class gov.nih.nlm.nls.vtt.Gui.MetaDataDialog

Set MetaDataDialog to be visible (show).

Show(Window, int, VttObj) - Method in class gov.nih.nlm.nls.vtt.Gui.TagsDialog

Set TagsDialog to be visible (show).

Show(Window, VttObj) - Method in class gov.nih.nlm.nls.vtt.Gui.TagsDialog

Set TagsDialog to be visible (show).

Show(MouseEvent, VttObj) - Method in class gov.nih.nlm.nls.vtt.Gui.VttPopupMenu

Set VttPopupMenu to be visible (show).

Show(Window, VttObj) - Method in class gov.nih.nlm.nls.vtt.Gui.ZoomDialog

Set this dialog to be visible (show).

ShowHelpDoc(int, VttObj) - Static method in class gov.nih.nlm.nls.vtt.Operations.HelpDocOperations

Show help documents.

SIMPLE_FORMAT - Static variable in class gov.nih.nlm.nls.vtt.Model.VttFormat

simple format: no alignment on fields

SIMPLE_FORMAT_STR - Static variable in class gov.nih.nlm.nls.vtt.Model.VttFormat

definition for simple format string

SIMPLEST_FORMAT - Static variable in class gov.nih.nlm.nls.vtt.Model.VttFormat

simplest format: no header, no annotation

SIMPLEST_FORMAT_STR - Static variable in class gov.nih.nlm.nls.vtt.Model.VttFormat

definition for simplest format string

SortMarkups() - Method in class gov.nih.nlm.nls.vtt.Model.Markups

Sort the markups by: offset (smaller go first) length (bigger go first if offset is the same)

SortTags() - Method in class gov.nih.nlm.nls.vtt.Model.Tags

Sort Tags by name|category.

SOURCE_IND_STR - Static variable in class gov.nih.nlm.nls.vtt.Lib.DiffUtil

source indent string

sourceScrollPane_ - Variable in class gov.nih.nlm.nls.vtt.Gui.MarkupsDiffDialog

SPACE_STR - Static variable in class gov.nih.nlm.nls.vtt.Lib.DiffUtil

space string

SPACE_STR - Static variable in class gov.nih.nlm.nls.vtt.Model.GlobalVars

space string

stateChanged(ChangeEvent) - Method in class gov.nih.nlm.nls.vtt.GuiControl.MarkupsDiffDialogControl

Override methods

stateChanged(ChangeEvent) - Method in class gov.nih.nlm.nls.vtt.GuiControl.MetaDataDialogControl

Override methods for tab panel change

stateChanged(ChangeEvent) - Method in class gov.nih.nlm.nls.vtt.GuiControl.TagsDialogControl

Override methods for tab panel change

stateChanged(ChangeEvent) - Method in class gov.nih.nlm.nls.vtt.GuiControl.ZoomDialogControl

Override methods for button & combo box

StatusPanel - Class in gov.nih.nlm.nls.vtt.Gui

This class is the status panel to show information, including caret position, highlight range, etc.

StatusPanel() - Constructor for class gov.nih.nlm.nls.vtt.Gui.StatusPanel

Create an StatusPanel object to show information.

Str - Class in gov.nih.nlm.nls.vtt.Model

This is the Str Java object class to provide operations on String.

StringStats - Class in gov.nih.nlm.nls.vtt.Lib

This code is to calculate the stats for a String.

StringStats() - Constructor for class gov.nih.nlm.nls.vtt.Lib.StringStats

The constructor of StringStats object.

StringStats(int, int, int, int, Vector<Integer>) - Constructor for class gov.nih.nlm.nls.vtt.Lib.StringStats

The constructor of StringStats object by specifying total number of characters, total number of characters with line feed, total number of words, total number of lines, and a vector of start position of each line

SynchronizCaret(Markup, VttObj) - Static method in class gov.nih.nlm.nls.vtt.Operations.SelectOperations

Synchronize caret position to the specified markup.