| National Library of Medicine

Bodenreider O. API: NDF-RT

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Bodenreider O. API: Prescribable

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Fung KW. API: RxTerms

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Aronson AR. API: Semantic Knowledge Representation

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Folio, L, Sigelman, J, Wang, Y, Lu, P, Antani SK, Jaeger S. Automatic Identification and Classification of Tuberculosis Findings on Chest Radiographs for Global Surveillance Programs [Abstract]. Annual Meeting of the American Roentgen Ray Society (ARRS)

Abstract | pub9226.pdf

Jaeger S. Chest X-ray Screening System: Segmentation Module – v3

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Schuette P, Callaghan F, Rochester CG. Confidence intervals for binomial proportions with applications to product safety signaling in drug exposure registries [Abstract]. Proc 2011 Joint Statistical Meetings. 2011 July 30.

Abstract | http://www.amstat.org/meetings/jsm/2011/onlineprogram/AbstractDetails.cfm?abstra...

Thoma GR, Razi A, Seamans J, Strupp-Adams A, Edwards L, Gao J, Ledoux MT. Dataset: AnatQuest

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Demner-Fushman D, Kilicoglu H. Dataset: CHQA Named Entity Dataset

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McDonald CJ, Abhyankar S, Taft L. Dataset: common units of measure - subset of the Unified Code for Units of Measure.

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Kilicoglu H. Dataset: Consumer Health Spelling Error Dataset

Abstract | https://ceb.nlm.nih.gov/ridem/infobot_docs/CHQA_SpellCorrection_Dataset.zip

Fung KW. Dataset: CORE problem list of SNOMED CT.

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Fung KW. Dataset: ICD-9-CM to SNOMED CT Map

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McDonald C. Dataset: LOINC Panels and Forms file

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McDonald CJ, Vreeman D, Goodwin RM. Dataset: LOINC Top 2000+ Lab Observations and Mapper's Guide

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McDonald C, Vreeman D, Goodwin RM. Dataset: LOINC Top 300+ Lab Orders

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Abhyankar S, Goodwin RM, Zuckerman AE, McDonald CJ. Dataset: newborn screening LOINC codes (AHIC panel).

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Abhyankar S, Goodwin RM, Zuckerman AE, McDonald CJ. Dataset: Newborn screening LOINC panel.

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Abhyankar S, Goodwin RM, Zuckerman A, McDonald CJ. Dataset: newborn screening results annotated example HL7 electronic message guidance (v 5.2).

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Fung KW. Dataset: Nursing Problem List Subset of SNOMED CT

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Demner-Fushman D, Roberts K. Dataset: Question Decomposition Data

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Demner-Fushman D, Roberts K. Dataset: Question Type Data

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Fung KW. Dataset: SNOMED CT route of administration subset.

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Fung K. Dataset: SNOMED CT to ICD-10 Cross Map

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Fung K. Dataset: SNOMED CT to ICD-10-CM Map

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Kilicoglu H. Dataset: Sortal Anaphora Dataset

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Kilicoglu H. Dataset: Structured Drug Product Label (SPL) Coreference Dataset

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Ackerman MJ. Dataset: Visible Human Project reference data sets.

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Lu C, Humphrey SM, Rogers W, Browne AC. Development of a semantic type based WSD tool [Abstract]. AMIA Annu Symp Proc 2009:943.

Abstract | pub2009067.pdf

Zeng K, Bodenreider O. Experience in Integrating Large RDF-based Biomedical Knowledge Resources with Oracle [Abstract]. Proc 8th International Oracle Life Sciences User Group Meeting 2007:(electronic proceedings: http://www.olsug.org/wiki/images/d/d1/Kelly_Zheng.pdf)

Abstract | pub2007008.pdf

McDonald CJ, Wang Y, Lynch P, Kanduru A. Feeding FHIR with LHC-Forms HL7 Partners in Interoperability Mt. Washington Conference Center, Baltimore, MD

Abstract | pub9748.pdf

McDonald CJ. FHIR Overview Presentation by Clement J. McDonald, MD

Abstract | pub9747.pdf

McDonald CJ, Maglott D, Abhyankar S, Goodwin R, Kanduru A, Lu S, Lynch P, Vreeman D, Wang Y, Wood G. HL7 Version 2.5.1 Implementation Guide: Lab Results Interface (LRI), Release 1, STU Release 4. US Realm, Chapter 5, Clinical Genomics Results Reporting. Published for May 2017 Ballot.

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Jaeger S. Malaria Datasets

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Sneiderman C, Rosemblat G, Bray B, Fiszman M, Rindflesch TC. Matching Clinical Observations in Published Cardiology Case Reports to LOINC [Abstract]. AMIA Annu Symp Proc; 2009 Nov 14-18; San Francisco. p. 1036.

Abstract | pub2009056.pdf

Altemus AR. Mobile App: Native Voices: Native Peoples' Concepts of Health and Illness

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Fontelo P. Mobile App: PubMed for Handhelds.

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Gill MJ, Pearson G, Neve L, Miernicki G, Antani SK, Thoma GR. Mobile App: ReUnite iOS app

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Thoma GR. Mobile App: Turning the Pages

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Lynch P, Wang Y, Kanduru A, Luan X, Mericle L, Lu S, McDonald CJ. On-the-Fly Data Capture Tooling for FHIR/HL7 V2 HL7 January 2018 Working Group Meeting, New Orleans, LA

Abstract | pub9749.pdf

Ben Abacha A, Agichtein E, Pinter Y, Demner-Fushman D. Overview of the Medical QA Task @ TREC 2017 LiveQA Track. TREC, Gaithersburg, MD, 2017.

Abstract | pub9773.pdf

Bodenreider O, Peters L, Nguyen T. RxNav: Browser and Application Programming Interfaces for Drug Information Sources [Abstract]. AMIA Annu Symp Proc 2011:2129

Abstract | pub2011018.pdf

Bodenreider O. Semantic Web for Translational Biomedicine: Two Pilot Experiments [Abstract]. Proc. MIA Summit on Translational Bioinformatics 2008:141

Abstract | pub2008025.pdf

Kilicoglu H. Software: Bio-SCoRes

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Neve L, Long LR, Antani SK. Software: Boundary Marking Tool 2 (BMT2)

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Lowekamp B, Yoo TS. Software: Insight Toolkit (ITK): Software for Image Segmentation and Registration.

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Kayaalp M, Dodd Z, Browne AC, Sagan, P, McDonald CJ. Software: NLM-Scrubber

Abstract | https://scrubber.nlm.nih.gov/

Thoma GR, Ford G, Demner-Fushman D, Antani SK, Chung M. Software: Panorama

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Lowekamp B, Chen D, Santoroski J, Yaniv Z, Yoo TS. Software: SimpleITK.

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Zeng K, Bodenreider O, Kilbourne J, Nelson SJ. Standards, Security and Usability: Experience with MyMedicationList [Abstract]. Proc. AMIA Spring Congress 2008

Abstract | pub2008035.pdf

Gordon E, Waisberg M, Ersoy I, Pena M, Jaeger S, Pierce S. The eye as a window to investigate the CNS microvasculature during a dynamic malaria infection (Abstract). Third Annual Seminar on Molecular Imaging of Infectious Diseases, September 23, 2013.

Abstract | pub8969.pdf

McDonald CJ. Top LOINC Codes – Orders and Observations

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Antani SK. Tuberculosis Chest X-ray Image Data Sets

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Callaghan FM. Tutorial: Biostatistics 101: introduction to power and sample size.

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Williams RJ. Tutorial: ClinicalTrials.gov: Registration and Results Submission Requirements

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Cimino JJ. Tutorial: meeting data access and reporting requirements with the NIH’s Biomedical Translational Research Information System (BTRIS).

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Fontelo P. Web Interface: askMEDLINE.

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Fontelo P. Web Interface: BabelMeSH.

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Fontelo P. Web Interface: Consensus Abstracts.

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Morrison SM. Web Interface: Genetics Home Reference

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Fung KW. Web Interface: I-Magic SNOMED-CT to ICD-10-CM code mapping tool.

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Lingappa G, Thoma GR, Antani SK. Web Interface: MyMorph

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Demner-Fushman D, Antani SK, Simpson M. Web Interface: Open-I

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Fontelo P. Web Interface: Pico (Patient, Intervention, Comparison, and Outcome) Linguist.

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Fontelo P. Web Interface: PICO (Patient, Intervention, Comparison, and Outcome).

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Bodenreider O. Web Interface: RxMix

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Bodenreider O. Web Interface: RxNav

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Fontelo P. Web Interface: The Bottom Line.

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Fontelo P. Web Interface: txt2MEDLINE.

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Thoma, GR. Where we’ve been.. And where we’re going. Talk given by George Thoma at his retirement.

Abstract | pub9882.pdf

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