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  • Rajaraman S, Candemir S, Xue Z, Alderson P, Thoma G, Antani SK. A Novel Stacked Model Ensemble for Improved TB Detection in Chest Radiographs. In Santosh KC et al. (Eds.). Medical Imaging: Artificial Intelligence, Image Recognition, and Machine Learning Techniques. (pp. 1-26). New York, NY: CRC Press, Taylor & Francis Group.
  • Xue Y, Zhou Q, Ye J, Long LR, Antani SK, Cornwell C, Xue Z, Huang X. Synthetic Augmentation and Feature-based Filtering for Improved Cervical Histopathology Image Classification. ArXiv, abs/1907.10655.
  • Ganesan P, Rajaraman S, Long LR, Ghoraani B, Antani SK. Assessment of Data Augmentation Strategies Toward Performance Improvement of Abnormality Classification in Chest Radiographs. Proc. IEEE Engineering in Medicine and Biology Conference (EMBC), Berlin, Germany, 23 – 27 July 2019. pp. 841 – 844.
  • Ganesan P, Xue Z, Singh S, Long LR, Ghoraani B, Antani SK. Performance Evaluation of a Generative Adversarial Network for Deblurring Mobile-phone Cervical Images. Proc. IEEE Engineering in Medicine and Biology Conference (EMBC), Berlin, Germany, 23 – 27 July 2019. pp. 4487 – 4490.
  • Rajaraman S, Sornapudi S, Kohli M, Antani SK. Assessment of an ensemble of machine learning models toward abnormality detection in chest radiographs. Proc. IEEE Engineering in Medicine and Biology Conference (EMBC), Berlin, Germany, 23 – 27 July 2019. pp. 3689 – 3692.
  • Kim J, Tran L, Chew E, Antani SK. Optic Disc and Cup Segmentation for Glaucoma Characterization Using Deep Learning 2019 IEEE 32th International Symposium on Computer-Based Medical Systems (CBMS), pp 489-494, Cordoba, Spain, June 2019.
  • Rajaraman S, Jaeger S, Antani SK. Performance evaluation of deep neural ensembles toward malaria parasite detection in thin-blood smear images. PeerJ 7:e6977
  • Kim I, Rajaraman S, Antani SK. Visual Interpretation of Convolutional Neural Network Predictions in Classifying Medical Image Modalities. Diagnostics (Basel). 2019 Apr 3;9(2). pii: E38. doi: 10.3390/diagnostics9020038.
  • Kim J, Tran L, Chew E, Antani SK, Thoma GR. Optic Disc Segmentation in Fundus Images Using Deep Learning. SPIE Medical Imaging 2019: Imaging Informatics for Healthcare, Research, and Applications, Vol. 10954, San Diego, USA, February 2019.
  • Rajaraman S, Candemir S, Thoma G, Antani SK. Visualizing and explaining deep learning predictions for pneumonia detection in pediatric chest radiographs. Proc. SPIE 10950, Medical Imaging 2019: Computer-Aided Diagnosis, 109500S (13 March 2019); doi: 10.1117/12.2512752.
  • Candemir S, Antani SK. A review on lung boundary detection in chest X-rays. Int J Comput Assist Radiol Surg. 2019 Feb 7. doi: 10.1007/s11548-019-01917-1.
  • Hu L, Bell D, Antani SK, Xue Z, Yu K, Horning MP, Gachuhi N, Wilson B, Jaiswal MS, Befano B, Long LR, Herrero R, Einstein MH, Burk RD, Demarco M, Gage JC, Wentzensen N, Schiffman M. An Observational Study of Deep Learning and Automated Evaluation of Cervical Images for Cancer Screening. J Natl Cancer Inst. 2019 Jan 10. doi: 10.1093/jnci/djy225
  • Jaeger S, Juarez-Espinosa OH, Candemir S, Poostchi M, Yang F, Kim L, Ding M, Folio LR, Antani SK, Gabrielian A, Hurt D, Rosenthal A, Thoma G. Detecting drug-resistant tuberculosis in chest radiographs. Int J Comput Assist Radiol Surg. 2018 Dec;13(12):1915-1925. doi: 10.1007/s11548-018-1857-9. Epub 2018 Oct 3.
  • Candemir S, Rajaraman S, Thoma GR, Antani SK. Deep Learning for Grading Cardiomegaly Severity in Chest X-rays: An Investigation. Proc. IEEE Life Sciences Conference (LSC 2018), Montreal, Quebec, Canada, 28 – 30 October 2018. pp. 109-113.
  • Dhoot R, Humphrey JM, O'Meara P, Gardner A, McDonald CJ, Ogot K, Antani SK, Abuya J, Kohli M. Implementing a mobile diagnostic unit to increase access to imaging and laboratory services in western Kenya. BMJ Glob Health. 2018 Oct 8;3(5):e000947. doi: 10.1136/bmjgh-2018-000947. eCollection 2018.
  • Poostchi M, Ilker E, McMenamin K, Gordon E, Palaniappan N, Pierce S, Maude RJ, Bansal A, Srinivasan P, Miller L, Palaniappan K, Thoma GR, Jaeger S. Malaria parasite detection and cell counting for human and mouse using thin blood smear microscopy. J Med Imaging (Bellingham). 2018 Oct;5(4):044506. doi: 10.1117/1.JMI.5.4.044506. Epub 2018 Dec 12.
  • Rajaraman S, Candemir S, Kim I, Thoma GR, Antani SK. Visualization and Interpretation of Convolutional Neural Network Predictions in Detecting Pneumonia in Pediatric Chest Radiographs. Appl. Sci. 2018, 8, 1715.
  • Moallem G, Sari-Sarraf H, Poostchi Mohammadabadi M, Maude R, Silamut K, Antani SK, Jaeger S. Detecting and segmenting overlapping red blood cells in microscopic images of thin blood smears. SPIE Medical Imaging, 2018.
  • Ben Abacha A, Gayen S, Lau JJ, Rajaraman S, Demner-Fushman D. NLM at ImageCLEF 2018 Visual Question Answering in the Medical Domain. CLEF2018 Working Notes. CEUR Workshop Proceedings, Avignon, France, CEUR-WS.org (September 10-14 2018).
  • Jaeger S, Juarez-Espinosa O, Candemir S, Poostchi Mohammadabadi M, Yang F, Kim L, Ding M, Folio L, Antani SK, Gabrielian A, Hurt D, Rosenthal A, Thoma GR. Detecting drug-resistant tuberculosis in chest radiographs International Journal of Computer Assisted Radiology and Surgery https://doi.org/10.1007/s11548-018-1857-9
  • Beare R, Lowekamp B, Yaniv Z. Image Segmentation, Registration and Characterization in R with SimpleITK. J Stat Softw. 2018 Aug;86. pii: 8. doi: 10.18637/jss.v086.i08. Epub 2018 Sep 4.
  • Vajda S, Karargyris A, Jaeger S, Santosh KC, Candemir S, Xue Z, Antani SK, Thoma GR. Feature Selection for Automatic Tuberculosis Screening in Frontal Chest Radiographs. J Med Syst. 2018 Jun 29;42(8):146. doi: 10.1007/s10916-018-0991-9.
  • Rajaraman S, Silamut K, Hossain MA, Ersoy I, Maude RJ, Jaeger S, Thoma GR, Antani SK. Understanding the learned behavior of customized convolutional neural networks toward malaria parasite detection in thin blood smear images. J Med Imaging (Bellingham). 2018 Jul;5(3):034501. doi: 10.1117/1.JMI.5.3.034501. Epub 2018 Jul 18.
  • Rajaraman S, Candemir S, Xue Z, Alderson P, Kohli M, Abuya J, Thoma GR, Antani SK. A novel stacked generalization of models for improved TB detection in chest radiographs. Proc. IEEE Engineering in Medicine and Biology Conference (EMBC 2018), Honolulu, Hawaii, 2018. pp. 718-721.
  • Xue Z, Long LR, Jaeger S, Folio L, Thoma GR. Extraction of Aortic Knuckle Contour in Chest Radiographs Using Deep Learning. EMBC 2018.
  • Thamizhvani TR, Lakshmanan S, Rajaraman S. Mobile application-based computer-aided diagnosis of skin tumours from dermal images. The Imaging Science Journal, 66:6, 382-391, 2018, DOI: 10.1080/13682199.2018.1492682
  • Xue Z, Rajaraman S, Long LR, Antani SK, Thoma GR. Gender Detection from Spine X-ray Images Using Deep Learning. Proc. IEEE International Symposium on Computer-Based Medical Systems (CBMS), Karlstad, Sweden, 2018. pp. 54-58, DOI:10.1109/CBMS.2018.00017.
  • Kim J, Candemir S, Chew E, Thoma GR. Region of Interest Detection in Fundus Images Using Deep Learning and Blood Vessel Information. The 31th IEEE International Symposium on Computer-Based Medical Systems. (IEEE CBMS 2018), pp. 357-362, Karlstad, Sweden, June 2018.
  • Yaniv Z, Lowekamp B, Johnson HJ, Beare R. SimpleITK Image-Analysis Notebooks: a Collaborative Environment for Education and Reproducible Research. J Digit Imaging. 2018 Jun;31(3):290-303. doi: 10.1007/s10278-017-0037-8.
  • Sornapudi S, Stanley RJ, Stoecker WV, Almubarak H, Long LR, Antani SK, Thoma GR, Zuna R, Frazier SR. Deep Learning Nuclei Detection in Digitized Histology Images by Superpixels. J Pathol Inform. 2018 Mar 5;9:5. doi: 10.4103/jpi.jpi_74_17. eCollection 2018.
  • Santosh KC, Antani SK. Automated chest x-ray screening: Can lung region symmetry help detect pulmonary abnormalities? doi: 10.1109/TMI.2017.2775636 vol. 37, no. 5, 1168-1177.
  • Rajaraman S, Antani SK, Poostchi Mohammadabadi M, Silamut K, Hossain MA, Maude RJ, Jaeger S, Thoma GR. Pre-trained convolutional neural networks as feature extractors toward improved malaria parasite detection in thin blood smear images. PeerJ. 2018 Apr 16;6:e4568. doi: 10.7717/peerj.4568. eCollection 2018.
  • Xue Z, Jaeger S, Antani SK, Long LR, Karargyris A, Siegelman J, Folio L, Thoma GR. Localizing tuberculosis in chest radiographs with deep learning. Proc SPIE 10579, Medical Imaging 2018: Imaging Informatics for Healthcare, Research, and Applications, 105790U (6 March 2018) pp. doi: 10.1117/12.2293022
  • Xue Z, Antani SK, Long LR, Thoma GR. Using deep learning for detecting gender in adult chest radiographs. Proc SPIE 10579, Medical Imaging 2018: Imaging Informatics for Healthcare, Research, and Applications, 105790D (6 March 2018) pp. doi: 10.1117/12.2293027.
  • Zohora FT, Antani SK, Santosh KC. Circle-like foreign element detection in chest x-rays using normalized cross-correlation and unsupervised clustering. Proc. SPIE 10574, Medical Imaging 2018: Image Processing, 105741V (2 March 2018); doi: 10.1117/12.2293739; doi.org/10.1117/12.2293739.
  • Almubarak H, Guo P, Stanley RJ, Long LR, Antani SK, Thoma GR. Algorithm Enhancements for Improvement of Localized Classification of Uterine Cervical Cancer Digital Histology Images. in Handbook of Research on Emerging Perspectives on Healthcare Information Systems and Informatics,. IGI Global (Hershey, PA).
  • Rajaraman S, Antani SK, Candemir S, Xue Z, Abuya J, Kohli M, Alderson P, Thoma GR. Comparing deep learning models for population screening using chest radiography. Proc. SPIE 10575, Medical Imaging 2018: Computer-Aided Diagnosis, 105751E (27 February 2018).
  • Thamizhvani TR, Lakshmanan S, Rajaraman S. Computer Aided Diagnosis of Skin Tumours from Dermal Images. Hemanth D., Smys S. (eds) Computational Vision and Bio Inspired Computing. Lecture Notes in Computational Vision and Biomechanics, vol 28. Springer, Cham
  • Xue Z, Jaeger S, Antani SK, Long LR, Karargyris A, Siegelman J, Folio LR, Thoma GR. Localizing tuberculosis in chest radiographs with deep learning. SPIE Medical Imaging 2018
  • Xue Z, Antani SK, Long LR, Thoma GR. Using deep learning for detecting gender in adult chest radiographs. SPIE Medical Imaging 2018
  • Poostchi M, Silamut K, Maude RJ, Jaeger S, Thoma GR. Image analysis and machine learning for detecting malaria. Transl Res. 2018 Apr;194:36-55. doi: 10.1016/j.trsl.2017.12.004. Epub 2018 Jan 12.
  • Bryant B, Sari-Sarraf H, Long LR, Antani SK. A Kernel Support Vector Machine Trained Using Approximate Global and Exhaustive Local Sampling. Proceedings of the 4th IEEE/ACM International Conference on Big Data Computing, Applications and Technologies (BDCAT) 2017, Austin, Texas, USA, December 2017. Pp. 267-8 DOI: https://doi.org/10.1145/3148055.3149206
  • de Herrera G, Long LR, Antani SK. Graph Representation for Content–based fMRI Activation Map Retrieval. Proceedings of 1st Life Sciences Conference, Sydney, Australia, December 2017 pp. 129-32 DOI: https://doi.org/10.1109/LSC.2017.8268160.
  • Rajaraman S, Antani SK, Xue Z, Candemir S, Jaeger S, Thoma GR. Visualizing abnormalities in chest radiographs through salient network activations in Deep Learning. Proc. IEEE Life Sciences Conference (LSC), Sydney, Australia, 2017. pp. 71-74, DOI:10.1109/LSC.2017.8268146.
  • Moallem G, Poostchi M, Yu H, Palaniappan N, Silamut K, Maude RJ, Hossain Md Amir, Jaeger S, Antani SK, Thoma GR. Detecting and Segmenting White Blood Cells in Microscopy Images of Thin Blood Smears [Poster]. Annual Meeting of the American Society of Tropical Medicine & Hygiene (ASTMH), Poster, 2017
  • Almubarak HA, Stanley RJ, Long LR, Antani SK, Thoma GR, Zuna R, Frazier SR. Convolutional Neural Network Based Localized Classification of Uterine Cervical Cancer Digital Histology Images. Procedia Computer Science, Volume 114, 2017, Pages 281-287, ISSN 1877-0509, https://doi.org/10.1016/j.procs.2017.09.044.
  • Fallavollita P, Kersten M, Linte CA, Pratt P, Yaniv Z. Guest Editors' Foreword: Special Issue on Augmented Environments for Computer-Assisted Interventions CAI systems enable more precise, safer, and less invasive interventional treatments [Letter]. Healthc Technol Lett. 2017 Oct 27;4(5):149. doi: 10.1049/htl.2017.0078. eCollection 2017 Oct.
  • Ekong DU, Fontelo P. Prototype telepathology solutions that use the Raspberry Pi and mobile devices. 2017 IEEE Global Humanitarian Technology Conference (GHTC), San Jose CA, 2017: 1-4.
  • Chatain GP, Patronas N, Smirniotopoulos J, James G, Piazza M, Benzo S, Ray-Chaudrury A, Sharma S, Lodish M, Nieman L, Stratakis CA, Chittiboina P. Potential utility of FLAIR in MRI-negative Cushing's disease. J Neurosurg. 2017 Oct 13:1-9. doi: 10.3171/2017.4.JNS17234.
  • Ghosh A, Brown GT, Fontelo P. Telepathology at the Armed Forces Institute of Pathology: A Retrospective Review of Consultations From 1996 to 1997. Arch Pathol Lab Med. 2018 Feb;142(2):248-252. doi: 10.5858/arpa.2017-0055-OA. Epub 2017 Oct 2.
  • Guan Y, Li M, Jaeger S, Lure F, Raptopoulos V, Lu P, Folio LR, Candemir S, Antani SK, Siegelman J, Li J, Wu T, Thoma GR, Qu S. Applying Artificial Intelligence and Radiomics for Computer Aided Diagnosis and Risk Assessment in Chest Radiographs. 2nd Conference on Machine Intelligence in Medical Imaging (CMIMI) of the Society for Imaging Informatics in Medicine (SIIM), Poster, 2017.
  • Moallem G, Jaeger S, Poostchi M, Palaniappan N, Yu H, Silamut K, Maude RJ, Antani SK, Thoma GR. White Blood Cell Detection and Segmentation in Microscopy Images of Thin Blood Smears [Poster]. NIH Research Festival, Poster, 2017
  • Coakley M, Hurt D, Weder N, Mtingwa M, Fincher EC, Alekseyev V, Chen D, Yun A, Gizaw M, Swan J, Yoo TS, Huyen Y. The NIH 3D Print Exchange: A Public Resource for Bioscientific and Biomedical 3D Prints 3D Print Additive Manufacturing, Sep. 1, 2014, 1(3):137-140.
  • Rajaraman S, Antani SK, Jaeger S. Visualizing Deep Learning Activations for Improved Malaria Cell Classification. Proceedings of The First Workshop in Medical Informatics and Healthcare (MIH 2017), Proceedings of Machine Learning Research (PMLR), v. 69, p. 40-47.
  • Marchell R, Locatis CN, Brgess G, Maisiak R, Liu WL, Ackerman M. Patient and Provider Satisfaction with Teledermatology. Telemed J E Health. 2017 Aug;23(8):684-690. doi: 10.1089/tmj.2016.0192. Epub 2017 Apr 4.
  • Candemir S, Antani SK, Xue Z, Thoma GR. Novel Method for Storyboarding Biomedical Videos for Medical Informatics. 30th IEEE International Symposium on Computer-Based Medical Systems
  • Gardner C, Liu F, Fontelo P, Flanagan MC, Hoang A, Burke HB. Assessing the usability by clinicians of VISION: A hierarchical display of patient-collected physiological information to clinicians. BMC Med Inform Decis Mak. 2017 Apr 14;17(1):41. doi: 10.1186/s12911-017-0435-3.
  • Borovikov E, Vajda S, Gill MJ. Face Match for Family Reunification: Real-World Face Image Retrieval International Journal of Computer Vision and Image Processing. DOI: 10.4018/IJCVIP.2017040102.
  • Mayer JE, Fontelo P. Meta-analysis on the effect of text message reminders for HIV-related compliance. AIDS Care. 2017 Apr;29(4):409-417. doi: 10.1080/09540121.2016.1214674. Epub 2016 Aug 1.
  • Ding M, Antani SK, Jaeger S, Xue Z, Candemir S, Kohli M, Thoma GR. Local-Global Classifier Fusion for Screening Chest Radiographs. Proc. SPIE 10138, Medical Imaging 2017: Imaging Informatics for Healthcare, Research, and Applications, 101380A (March 13, 2017); doi:10.1117/12.2252459
  • Xue Z, Antani SK, Long LR, Thoma GR. Automatic multi-label annotation of abdominal CT images using CBIR. Proc. SPIE 10138, Medical Imaging 2017: Imaging Informatics for Healthcare, Research, and Applications, 1013807 (March 13, 2017); doi:10.1117/12.2254368.
  • Marchell R, Locatis C, Burges G, Maisiak R, Liu WL, Ackerman M. Comparing High Definition Live Interactive and Store-and-Forward Consultations to In-Person Examinations. Telemed J E Health. 2017 Mar;23(3):213-218. doi: 10.1089/tmj.2016.0093. Epub 2016 Oct 5.
  • Lure F, Jaeger S, Antani SK. Automated Systems for microscopic and radiographic tuberculosis screening. Electronic Journal of Emerging Infectious Diseases, Vol. 2, No. 1, pp. 5-9, February 2017. [In Chinese]
  • KC S, Antani SK. Automated chest X-ray screening: Can lung region symmetry help detect pulmonary abnormalities? IEEE Transactions on Medical Imaging. doi: https://doi.org/10.1109/TMI.2017.2775636.
  • KC S, Aafaque A, Antani SK, Thoma GR. Line Segment-Based Stitched Multipanel Figure Separation for Effective Biomedical CBIR. Int. J. Patt. Recogn. Artif. Intelligence 31, 1757003 (2017) https://doi.org/10.1142/S0218001417570038.
  • Guo P, Almubarak H, Banerjee K, Stanley RJ, Long LR, Antani SK, Thoma GR, Zuna R, Frazier S, Moss R, Stoecker W. Enhancements in localized classification for uterine cervical cancer digital histology image assessment. J Pathol Inform. 2016 Dec 30;7:51. doi: 10.4103/2153-3539.197193. eCollection 2016.
  • Borovikov E, Vajda S. FaceMatch: real-world face image retrieval. In: Santosh K., Hangarge M., Bevilacqua V., Negi A. (eds) Recent Trends in Image Processing and Pattern Recognition. RTIP2R 2016. Communications in Computer and Information Science, vol 709. Springer, Singapore. 405-419.
  • De Herrera A, Long LR, Antani SK. Content-Based fMRI Brain Maps Retrieval. International Conference on Brain and Health Informatics, Omaha, NE, USA, October 13-16, 2016.
  • Ben Abacha A, de Herrera A, Wang Ke, Long LR, Antani SK, Demner-Fushman D. Named entity recognition in functional neuroimaging literature. 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), Kansas City, MO, 2017, pp. 2218-2220.
  • Jaeger S, Silamut K, Yu H, Poostchi Mohammadabadi M, Ersoy I, Powell A, Liang Z, Hossain M, Antani SK, Palaniappan K, Maude R, Thoma GR. Reducing the Diagnostic Burden of Malaria Using Microscopy Image Analysis and Machine Learning in the Field [Poster]. Annual Meeting of the American Society of Tropical Medicine & Hygiene (ASTMH), Atlanta, USA, 2016.
  • Liang Z, Powell A, Ersoy I, Poostchi M, Silamut K, Palaniappan K, Guo P, Hossain M, Antani SK, Maude R, Huang J, Jaeger S, Thoma GR. CNN-Based Image Analysis for Malaria Diagnosis. IEEE International Conference on Bioinformatics & Biomedicine (BIBM), Shenzhen, China, 2016.
  • Guo P, Stanley RJ, De S, Long LR, Antani SK, Thoma GR, Demner-Fushman D, Sornapudia S. Features Advances to Automatically Find Images for Application to Clinical Decision Support. Medical Research Archives. 4(7) 2016. DOI: 10.18103/mra.v4i7.761
  • Linte CA, Yaniv Z. Image-Guided Interventions: We've come a long way, but are we there? IEEE Pulse. 2016 Nov-Dec;7(6):46-50.
  • Kochmann M, Locatis CN. Telemedicine in the Apple App Store: An exploratory study of teledermatology apps. In Smari, W. & Natarian, J. (Eds.), Proc 2016 Int Conf Collaboration Technologies and Systems, Orlando, Florida, October 31-November 4, Institute for Electrical and Electronic Engineers & Association for Computing Machinery, 534-537.
  • Marchell R, Locatis CN, Ackerman MA. High definition live interactive and store and forward teledermatology: A comparison of concordance, confidence, and satisfaction with in-person exams. In Smari, W. & Natarian, J. (Eds.), Proceedings of the 2016 International Conference on Collaboration Technologies and Systems, Orlando, Florida, October 31. Institute for Electrical and Electronic Engineers & Association for Computing Machinery, 520-523.
  • De Herrera A, Long LR, Antani SK. Content–based fMRI activation maps retrieval [Poster]. BIH 2016: Brain Informatics and Health pp 173-180, October 13-16, 2016.
  • Borovikov E, Vajda S, Lingappa G, Bonifant MC. Parallel Computing in Face Image Retrieval: Practical Approach to the Real-World Image Search. Multi-Core Computer Vision and Image Processing for Intelligent Applications. IGI Global, 2017. 155-189. Web. 12 Sep. 2016. doi:10.4018/978-1-5225-0889-2.ch006
  • Mrabet Y, Vougiouklis P, Kilicoglu H, Gardent C, Demner-Fushman D, Hare J, Simperl E. Aligning Texts and Knowledge Bases with Semantic Sentence Simplification. WebNLG 2016.
  • Borovikov E, Bonifant MC, Lingappa G, Gill MJ, Thoma GR. FaceMatch: a visual search system for family reunification during disasters [Poster]. NIH Research Festival, September 2016
  • KC S, Vajda S, Antani S, Thoma GR. Edge map analysis in chest X-rays for automatic pulmonary abnormality screening. Int J Comput Assist Radiol Surg. 2016 Sep;11(9):1637-46. doi: 10.1007/s11548-016-1359-6. Epub 2016 Mar 19.
  • Xu T, Zhang H, Xin C, Kim E, Long LR, Xue Z, Antani SK, Huang Z. Multi-feature based Benchmark for Cervical Dysplasia Classification Evaluation. Pattern Recognition. ISSN 0031-3203, DOI: 10.1016/j.patcog.2016.09.027.
  • Kochmann M, Locatis C. Direct to Consumer Mobile Teledermatology Apps: An Exploratory Study. Telemed J E Health. 2016 Aug;22(8):689-93. doi: 10.1089/tmj.2015.0189. Epub 2016 Mar 9.
  • Shin HC, Roberts K, Lu L, Demner-Fushman D. Learning to Read Chest X-Rays: Recurrent Neural Cascade Model for Automated Image Annotation. IEEE Conference on Computer Vision and Pattern Recognition (CVPR), 2016.
  • Candemir S, Jaeger S, Antani S, Bagci U, Folio LR, Xu Z, Thoma G. Atlas-based rib-bone detection in chest X-rays. Comput Med Imaging Graph. 2016 Jul;51:32-9. doi: 10.1016/j.compmedimag.2016.04.002. Epub 2016 Apr 13.
  • KC S, Alam M, Roy P, Wendling L, Antani SK, Thoma GR. A simple and efficient arrowhead detection in biomedical images. International J Pattern Recognition and Artificial Intelligence (IJPRAI), 30(5), 1657002, 2016, DOI: 10.1142/S0218001416570020.
  • KC S, Wendling L, Antani SK, Thoma GR. Overlaid arrow detection for labeling biomedical image regions. IEEE Intelligent Systems, Special Issue on Pattern Recognition, 31(3):66-75, May-June 2016.DOI: 10.1109/MIS.2016.24.
  • Xue Z, Antani SK, Long LR, Demner-Fushman D, Thoma GR. Improving face image extraction by using deep learning technique. Proc. SPIE 9789, Medical Imaging 2016: PACS and Imaging Informatics: Next Generation and Innovations, 97890J (March 25, 2016); doi:10.1117/12.2216278.
  • Candemir S, Jaeger S, Lin W, Xue Z, Antani SK, Thoma GR. Automatic heart localization and radiographic index computation in chest x-rays. Proc. SPIE. 9785, Medical Imaging 2016: Computer-Aided Diagnosis, 978517. DOI: 10.1117/12.2217209.
  • Faruque J, Antani SK, Long LR, Kim L, Thoma GR. Image similarity ranking of focal computed tomography liver lesions using a 2AFC technique. Proc. SPIE. 9787, Medical Imaging 2016: Image Perception, Observer Performance, and Technology Assessment, 97870N. DOI: 10.1117/12.2217364.
  • KC S, Naved A, Roy PP, Wendling L, Antani SK, Thoma GR. Arrowhead detection in biomedical images. Proceedings IS&T Electronic Imaging, Document Recognition and Retrieval XXIII, 2016, pp. 1-7.
  • Yaniv Z. Registration for Orthopaedic Interventions. Chapter 3 in: Zheng G, Li S, editors. Computational Radiology for Orthopaedic Interventions: Lecture Notes in Computational Vision and Biomechanics. Springer International Publishing; c2016. p. 41-70.
  • Guo P, Banerjee K, Stanley RJ, Long LR, Antani SK, Thoma GR, Frazier SR, Moss RH, Stoecker WV. Nuclei-Based Features for Uterine Cervical Cancer Histology Image Analysis with Fusion-based Classification. DOI 10.1109/JBHI.2015.2483318 IEEE Journal of Biomedical and Health Informatics
  • Karargyris A, Siegelman J, Tzortzis D, Jaeger S, Candemir S, Xue Z, KC S, Vajda S, Antani SK, Folio L, Thoma GR. Combination of texture and shape features to detect pulmonary abnormalities in digital chest X-rays. Int J Comput Assist Radiol Surg. 2016 Jan;11(1):99-106. doi: 10.1007/s11548-015-1242-x. Epub 2015 Jun 20.
  • Zhang K, Liu WL, Locatis CN, Ackerman MJ. Mobile Videoconferencing Apps for Telemedicine. Telemed J E Health. 2016 Jan;22(1):56-62. doi: 10.1089/tmj.2015.0027. Epub 2015 Jul 23.
  • Webster RJ, Yaniv Z. Image-Guided Procedures, Robotic Interventions, and Modeling. Proc. SPIE 9786. (ISBN: 9781510600218 ).
  • Xue Z, Candemir S, Antani SK, Long LR, Jaeger S, Demner-Fushman D, Thoma GR. Foreign Object Detection in Chest X-rays. Proc IEEE International Conference on Bioinformatics and Biomedicine (BIBM) 2015, International Workshop on Biomedical and Health Informatics, Bethesda, Maryland, Nov. 9-12, 2015, pp: 56-61.
  • Rossi E, Fontelo P, Ackerman M, Pozzi G, Marceglia S. A Prototype of Mobile app/EHR Communication through Standards for Home Treatment of Transcranial Direct Current Stimulation. International Conference on Healthcare Informatics (ICHI), Dallas TX, 2015. 310-315.
  • Xu T, Xin C, Long LR, Antani SK, Xue Z, Kim E, Huang X. A New Image Data Set and Benchmark for Cervical Dysplasia Classification Evaluation. Machine Learning in Medical Imaging: 6th International Workshop, MLMI 2015, LNCS 9352, pp. 26–35, 2015. DOI: 10.1007/978-3-319-24888-2 4.
  • Antani SK. Automatic x-ray screening for tuberculosis. SPIE Newsroom. October 2015. DOI: 10.1117/2.1201509.006128
  • Rahman MM, Antani SK, Demner-Fushman D, Thoma GR. Biomedical image representation approach using visualness and spatial information in a concept feature space for interactive region-of-interest-based retrieval. J Med Imaging (Bellingham). 2015 Oct;2(4):046502. doi: 10.1117/1.JMI.2.4.046502. Epub 2015 Dec 30.
  • Folio, L, Sigelman, J, Wang, Y, Lu, P, Antani SK, Jaeger S. Automatic Identification and Classification of Tuberculosis Findings on Chest Radiographs for Global Surveillance Programs [Abstract]. Annual Meeting of the American Roentgen Ray Society (ARRS)
  • Ruiz A, Allette K, Francis D, Lamping E, Jaeger S, Folio L, Apolo A. Patterns of soft tissue metastasis in patients with urothelial carcinoma using tumor volume heatmaps [Poster]. NIH Summer Research Program Poster Day, Aug 6, 2015
  • Marceglia S, Fontelo P, Rossi E, Ackerman MJ. A Standards-Based Architecture Proposal for Integrating Patient mHealth Apps to Electronic Health Record Systems. Appl Clin Inform. 2015 Aug 5;6(3):488-505. doi: 10.4338/ACI-2014-12-RA-0115. eCollection 2015.
  • Yaniv Z, Linte CA. Applications of Augmented Reality in the Operating Room. Chapter 19 in Fundamentals of Wearable Computers and Augmented Reality, 2nd ed. CRC Press, 2015.
  • Candemir S, Borovikov E, KC S, Antani SK, Thoma GR. RSILC: Rotation- and Scale-Invariant, Line-based Color-aware descriptor. Image and Vision Computing, Volume 42, October 2015, Pages 1-12, ISSN 0262-8856. doi:10.1016/j.imavis.2015.06.010.
  • Fontelo P, Liu F, Yagi Y. Evaluation of a smartphone for telepathology: Lessons learned. J Pathol Inform. 2015 Jun 23;6:35. doi: 10.4103/2153-3539.158912. eCollection 2015.
  • KC S, Vajda S, Antani SK, Thoma GR. Automatic Pulmonary Abnormality Screening using Thoracic Edge Map. IEEE, 28th International Symposium on Computer-Based Medical Systems (CBMS), pp. 360-361, 2015.
  • KC S, Antani SK, Thoma GR. Stitched Multipanel Biomedical Figure Separation. IEEE, 28th International Symposium on Computer-Based Medical Systems (CBMS), pp. 54-59, 2015.
  • Xue Z, You D, Candemir S, Jaeger S, Antani SK, Long LR, Thoma GR. Chest X-ray Image View Classification The 28th IEEE International Symposium on Computer-Based Medical Systems
  • Marchell R, Locatis CN, Ackerman MJ. High definition live interactive and store and forward teledermatology: initial qualitative observations. In W. Smari, W. McQuay, and M. Nygard (Eds.), Proc. IEEE 2015 International Conference on Collaboration Technologies and Systems, Atlanta, Georgia, June 1-5, 446-449.
  • Vajda S, Rangoni Y, Cecotti H. Semi-automatic ground truth generation using unsupervised clustering and limited manual labeling: Application to handwritten character recognition. Pattern Recognit Lett. 2015 Jun 1;58:23-28.
  • Locatis CN, Gaines C, Liu WL, Gill MJ, Ackerman MJ. Lessons learned from ten years of distance learning outreach. J Med Libr Assoc. 2015 Apr;103(2):78-82. doi: 10.3163/1536-5050.103.2.004.
  • Marceglia S, Fontelo P, Ackerman MJ. Transforming consumer health informatics: connecting CHI applications to the health-IT ecosystem. J Am Med Inform Assoc. 2015 Apr;22(e1):e210-2. doi: 10.1093/jamia/ocu030. Epub 2015 Feb 8.
  • Xu T, Huang X, Kim E, Long LR, Antani SK. Multi-test cervical cancer diagnosis with missing data estimation. Proc. SPIE. 9414, Medical Imaging 2015: Computer-Aided Diagnosis, 94140X. (March 20, 2015) doi: 10.1117/12.2080871.
  • Candemir S, Antani SK, Jaeger SR, Thoma GR. Lung boundary detection in pediatric chest x-rays. Proc. SPIE. 9418, Medical Imaging 2015: PACS and Imaging Informatics: Next Generation and Innovations, 94180Q. (March 17, 2015) doi: 10.1117/12.2081060.
  • Rahman MM, Antani SK, Demner-Fushman D, Thoma GR. A visual concept-based interactive biomedical image retrieval using entropy and spatial information. Proc. SPIE. 9418, Medical Imaging 2015: PACS and Imaging Informatics: Next Generation and Innovations, 94180U. (March 17, 2015) doi: 10.1117/12.2081456.
  • Xue Z, You D, Chachra S, Antani SK, Long LR, Demner-Fushman D, Thoma GR. Extraction of endoscopic images for biomedical figure classification. Proc. SPIE. 9418, Medical Imaging 2015: PACS and Imaging Informatics: Next Generation and Innovations, 94180P. (March 17, 2015) doi: 10.1117/12.2081033.
  • Demner-Fushman D, Antani S, Kalpathy-Cramer J, Müller H. A decade of community-wide efforts in advancing medical image understanding and retrieval. Comput Med Imaging Graph. 2015 Jan;39:1-2. doi: 10.1016/j.compmedimag.2014.12.002.
  • KC S, Candemir S, Jaeger S, Folio L, Karargyris A, Antani SK, Thoma GR. Automatically detecting rotation in chest radiographs using principal rib-orientation measure for quality control. Int. J. Patt. Recogn. Artif. Intell, Vol 29 No. 2. DOI: 10.1142/S021800141.5570013
  • KC S, Xue Z, Antani SK, Thoma GR. NLM at ImageCLEF 2015: Biomedical Multipanel Figure Separation. Editors: Cappellato, L., Ferro, N., Jones, G., and San Juan, E., CLEF 2015 Labs and Workshops, Notebook Papers. CEUR WorkshopProceedings (CEUR-WS.org), ISSN 1613-0073, http://ceur-ws.org/ Vol-1391/.
  • Song D, Kim E, Huang X, Patruno J, Munoz-Avila H, Heflin J, Long LR, Antani SK. Multimodal entity coreference for cervical dysplasia diagnosis. IEEE Transactions on Medical Imaging, 34(1), January 2015, 229-245.
  • Jaeger S, Candemir S, Antani SK, Wang Y, Lu P, Thoma GR. Two public chest X-ray datasets for computer-aided screening of pulmonary diseases. Quant Imaging Med Surg. 2014 Dec;4(6):475-7. doi: 10.3978/j.issn.2223-4292.2014.11.20.
  • Xue Z, Bryant B, Long LR, Sari-Sarraf H, Thoma GR, Wachtel M. A Client-Server Tool for Automatic Fast GPU-based Detection of Squamous Epithelium Tissue Regions in Histology Images [Poster]. RSNA 2014. Chicago, USA, Nov 30-Dec 5, 2014
  • Gordon, E, Ersoy, I, Jaeger S, Waisberg, M, Pena, M, Thoma GR, Antani SK, Pierce, S, Palaniappan, K. Retinal Microcirculation Dynamics During an Active Malarial Infection [Poster]. Annual Meeting of the American Society of Tropical Medicine and Hygiene (ASTMH), 2014.
  • Rondonotti E, Koulaouzidis A, Karargyris A, Giannakou A, Fini L, Soncini M, Pennazio M, Douglas S, Shams A, Lachlan N, Zahid A, Mandelli G, Girelli C. Utility of 3-dimensional image reconstruction in the diagnosis of small-bowel masses in capsule endoscopy (with video). Gastrointest Endosc. 2014 Oct;80(4):642-51. doi: 10.1016/j.gie.2014.04.057. Epub 2014 Jul 3.
  • Do T, Murphy G, Earl LA, Del Prete GQ, Grandinetti G, Li GH, Estes JD, Rao P, Trubey CM, Thomas J, Spector J, Bliss D, Nath A, Lifson JD, Subramaniam S. Three-dimensional imaging of HIV-1 virological synapses reveals membrane architectures involved in virus transmission. J Virol. 2014 Sep;88(18):10327-39. doi: 10.1128/JVI.00788-14. Epub 2014 Jun 25.
  • KC S, Wendling L, Antani SK, Thoma GR. Scalable arrow detection in biomedical images. Pattern Recognition (ICPR), 2014 22nd International Conference; pp 3257-62. DOI: 10.1109/ICPR.2014.561
  • Linte CA, Yaniv Z, Fallavollita P, Abolmaesumi P, Holmes DR III, editors. Augmented Environments for Computer-Assisted Interventions 2014: 9th International AE-CAI Workshop. Held in conjunction with MICCAI 2014. 2014 Sep 14; Boston. Lecture Notes in Computer Science, vol. 8678. Springer; 2014. 149 pages.
  • Nagy DA, Haidegger T, Yaniv Z. A framework for semi-automatic fiducial localization in volumetric images. In: Linte CA, Yaniv Z, Fallavollita P, Abolmaesumi P, Holmes DR III, editors. Augmented Environments for Computer-Assisted Interventions 2014: Proceedings of 9th International AE-CAI Workshop; 2014 Sep 14; Boston. Lecture Notes in Computer Science vol. 8678. Springer; 2014. p. 138-48.
  • KC S, Candemir S, Jaeger S, Folio L, Karargyris A, Antani SK, Thoma GR. Rotation detection in chest radiographs based on generalized line histogram of rib-orientations. IEEE 27th International Symposium on Computer-Based Medical Systems, New York, NY, USA, May 27-29, 2014: page 138-142.
  • Ren H, Campos-Nanez E, Yaniv Z, Banovac F, Abeledo H, Hata N, Cleary K. Treatment planning and image guidance for radiofrequency ablation of large tumors. IEEE J Biomed Health Inform. 2014 May;18(3):920-8. doi: 10.1109/JBHI.2013.2287202. Epub 2013 Oct 24.
  • Xue Z, Antani SK, Long LR, Demner-Fushman D, Thoma GR. Body Segment Classification for Visible Human Cross Section Slices. IEEE 27th International Symposium on Computer-Based Medical Systems (CBMS), New York, NY, May 2014: pp. 199-204
  • You D, Antani SK, Demner-Fushman D, Thoma GR. A MRF Model for Biomedical Image Segmentation. CBMS 2014. May 2014.
  • Yaniv Z, Holmes DR III, editors. Medical Imaging 2014: Image-Guided Procedures, Robotic Interventions, and Modeling. Proceedings of conference held 2014 Feb 15-20; San Diego. Proc. SPIE 9036; 2014 Mar 12. 764 pages. ISBN: 9780819498298.
  • Linte CA, Yaniv Z. When change happens: computer assistance and image guidance for minimally invasive therapy. Healthcare Technology Letters. 2014 Mar 25;1(1):2-5.
  • Pedrosa G, Rahman MM, Antani SK, Demner-Fushman D, Long LR, Traina A. Integrating visual words as bunch of n-grams for effective biomedical image classification. Proceedings of IEEE WACV 2014: IEEE Winter Conference on Applications of Computer Vision. Steamboat Springs, CO. March 24-26, 2014.
  • Gong RH, Jenkins B, Sze RW, Yaniv Z. A cost effective and high fidelity fluoroscopy simulator using the image-guided surgery toolkit (IGSTK). In: Yaniv Z, Holmes DR III, editors. Medical Imaging 2014: Image-Guided Procedures, Robotic Interventions, and Modeling; 2014 Feb 15-20; San Diego. Proc. SPIE 9036; 2014 Mar 12:11 pages. DOI: 10.1117/12.2044112.
  • Guler, O, Yaniv Z. A tutorial on image guided therapy. Chapter 11 in: Birkfellner W, editor. Applied Medical Image Processing, Second Edition: A Basic Course. London: CRC Press; 2014. ISBN: 9781466555570.
  • Narayan K, Danielson CM, Lagarec K, Lowekamp BC, Coffman P, Laquerre A, Phaneuf MW, Hope TJ, Subramaniam S. Multi-resolution correlative focused ion beam scanning electron microscopy: applications to cell biology. J Struct Biol. 2014 Mar;185(3):278-84. doi: 10.1016/j.jsb.2013.11.008. Epub 2013 Dec 1.
  • Candemir S, Jaeger S, Palaniappan K, Musco J, Singh RK, Xue Z, Karargyris A, Antani SK, Thoma GR, McDonald CJ. Lung segmentation in chest radiographs using anatomical atlases with nonrigid registration. IEEE Trans Med Imaging. 2014 Feb;33(2):577-90. doi: 10.1109/TMI.2013.2290491. Epub 2013 Nov 13.
  • Caudle KE, Klein TE, Hoffman JM, Muller DJ, Whirl-Carrillo M, Gong L, McDonagh EM, Sangkuhl K, Thorn CF, Schwab M, Agundez JA, Freimuth RR, Huser V, Lee MT, Iwuchukwu OF, Crews KR, Scott SA,, Wadelius M, Swen JJ, Tyndale RF, Stein CM, Roden D, Relling MV, Williams MS, Johnson SG. Incorporation of pharmacogenomics into routine clinical practice: the Clinical Pharmacogenetics Implementation Consortium (CPIC) guideline development process. Curr Drug Metab. 2014 Feb;15(2):209-17.
  • Jaeger S, Karargyris A, Candemir S, Folio L, Siegelman J, Callaghan FM, Xue Z, Palaniappan K, Singh RK, Antani SK, Thoma GR, Wang Y, Lu P, McDonald CJ. Automatic tuberculosis screening using chest radiographs. IEEE Trans Med Imaging. 2014 Feb;33(2):233-45. doi: 10.1109/TMI.2013.2284099. Epub 2013 Oct 1.
  • You D, Antani SK, Demner-Fushman D, Thoma GR. A Contour-based Shape Descriptor For Biomedical Image Classification and Retrieval. Proceedings of SPIE 2014, Vol. 9021, Document Recognition and Retrieval XXI. February 2014;9021.
  • Goldbach H, Chang AY, Kyer A, Ketshogileng D, Taylor L, Chandra A, Dacso M, Kung SJ, Rijken T, Fontelo P, Littman-Quinn R, Seymour AK, Kovarik CL. Evaluation of generic medical information accessed via mobile phones at the point of care in resource-limited settings. J Am Med Inform Assoc. 2014 Jan-Feb;21(1):37-42. doi: 10.1136/amiajnl-2012-001276. Epub 2013 Mar 27.
  • Lowekamp BC, Chen DT, Ibáñez L, Blezek D. The Design of SimpleITK. Front Neuroinform. 2013 Dec 30;7:45. doi: 10.3389/fninf.2013.00045. eCollection 2013.
  • Fontelo P, Gavino A, Sarmiento RF. Comparing data accuracy between structured abstracts and full-text journal articles: implications in their use for informing clinical decisions. Evid Based Med. 2013 Dec;18(6):207-11. doi: 10.1136/eb-2013-101272. Epub 2013 Jun 20.
  • Karargyris A, Rondonotti E, Mandelli G, Koulaouzidis A. Evaluation of 4 three-dimensional representation algorithms in capsule endoscopy images. World J Gastroenterol. 2013 Nov 28;19(44):8028-33. doi: 10.3748/wjg.v19.i44.8028.
  • Lowekamp B, Chen D. BinShrink: A multi-resolution filter with cache efficient averaging. Insight Journal. Web. 18 November 2013
  • Fontelo P, Liu F. Mobile app versus Web app: a comparison using 2008-2012 "PubMed for Handhelds" server data. AMIA Annu Symp Proc. 2013 Nov 16;2013:445-50. eCollection 2013.
  • Sheets L, Liu F, Sarmiento RF, Gavino A, Fontelo P. Optimizing the txt2MEDLINE search portal for low-resource clinical decision support. AMIA Annu Symp Proc. 2013 Nov 16;2013:1277-81. eCollection 2013.
  • Borovikov E, Vajda S, Lingappa G, Candemir S, Antani SK, Gill MJ, Thoma GR. FaceMatch: visual search of missing persons during a disaster event [Poster]. NIH Intramural Research Festival, Bethesda MD, November 6-8, 2013.
  • Karargyris A, Candemir S, Jaeger S, Xue Z, Antani SK, Thoma GR. A Combined Approach for Lung Boundary Segmentation of Chest X-Ray Images [Poster]. NIH Intramural Research Festival, Bethesda MD, November 6-8, 2013.
  • Karargyris A, Folio L, Siegelman J, Callaghan FM, Candemir S, Xue Z, Lu P-X, Wang Y, Antani SK, Thoma GR, Jaeger S. Comparing the Performance of Man and Machine for TB Screening in Chest Radiographs [Poster]. NIH Intramural Research Festival, Bethesda MD, November 6-8, 2013.
  • Rahman MM, Antani SK, Demner-Fushman D, Thoma GR. An Interactive Region-Of-interest (ROI)- Based Image Retrieval Approach of Biomedical Articles in a Local Concept- Based Feature Space [Poster]. NIH Intramural Research Festival, Bethesda MD, November 6-8, 2013.
  • Xue Z, Jaeger S, Karargyris A, Candemir S, Antani SK, Long LR, Thoma GR, McDonald CJ. A System for Automated Screening for Tuberculosis using Digital Chest X-rays for Resources-Constrained Regions [Poster]. NIH Intramural Research Festival, Bethesda MD, November 6-8, 2013.
  • You D, Antani SK, Demner-Fushman D, Thoma GR. Does figure-text improve biomedical image retrieval [Poster]. NIH Intramural Research Festival, Bethesda MD, November 6-8, 2013.
  • Johnson HL, Fontelo P, Olsen CH, Jones KD, Gimbel RW. Family nurse practitioner student perception of journal abstract usefulness in clinical decision making: a randomized controlled trial. J Am Assoc Nurse Pract. 2013 Nov;25(11):597-603. doi: 10.1111/1745-7599.12013. Epub 2013 Mar 6.
  • Gordon E, Waisberg M, Ersoy I, Pena M, Jaeger S, Pierce S. The eye as a window to investigate the CNS microvasculature during a dynamic malaria infection (Abstract). Third Annual Seminar on Molecular Imaging of Infectious Diseases, September 23, 2013.
  • Karargyris A, Koulaouzidis A. Capsule-odometer: a concept to improve accurate lesion localisation. World J Gastroenterol. 2013 Sep 21;19(35):5943-6. doi: 10.3748/wjg.v19.i35.5943.
  • Ackerman MJ. Computer briefs: the healthcare trifecta. J Med Pract Manage. 2013 Sep-Oct;29(2):140-1.
  • Borovikov E, Vajda S, Lingappa G, Antani SK, Thoma GR. Face matching for post-disaster family reunification. IEEE International Conference on Healthcare Informatics. Philadelphia, PA, USA. September 2013.
  • Zhang K, Liu WL, Locatis C, Ackerman M. Uncompressed high-definition videoconferencing tools for telemedicine and distance learning. Telemed J E Health. 2013 Aug;19(8):579-84. doi: 10.1089/tmj.2012.0219. Epub 2013 Jun 29.
  • Sheets L, Gavino A, Callaghan F, Fontelo P. Do language fluency and other socioeconomic factors influence the use of PubMed and MedlinePlus? Appl Clin Inform. 2013 Apr 10;4(2):170-84. doi: 10.4338/ACI-2013-01-RA-0006. Print 2013.
  • Schauder DM, Kuybeda O, Zhang J, Klymko K, Bartesaghi A, Borgnia MJ, Mayer ML, Subramaniam S. Glutamate receptor desensitization is mediated by changes in quaternary structure of the ligand binding domain. Proc Natl Acad Sci U S A. 2013 Apr 9;110(15):5921-6. doi: 10.1073/pnas.1217549110. Epub 2013 Mar 25.
  • Jaeger S, Karargyris A, Candemir S, Siegelman J, Folio L, Antani S, Thoma G. Automatic screening for tuberculosis in chest radiographs: a survey. Quant Imaging Med Surg. 2013 Apr;3(2):89-99. doi: 10.3978/j.issn.2223-4292.2013.04.03.
  • Liu J, Subramanian KR, Yoo TS. An optical flow approach to tracking colonoscopy video. Comput Med Imaging Graph. 2013 Apr;37(3):207-23. doi: 10.1016/j.compmedimag.2013.01.010. Epub 2013 Mar 13.
  • Marcelo A, Gavino A, Isip-Tan IT, Apostol-Nicodemus L, Mesa-Gaerlan FJ, Firaza PN, Faustorilla JF Jr., Callaghan FM, Fontelo P. A comparison of the accuracy of clinical decisions based on full-text articles and on journal abstracts alone: a study among residents in a tertiary care hospital. Evid Based Med. 2013 Apr;18(2):48-53. doi: 10.1136/eb-2012-100537. Epub 2012 Jul 10.
  • Bryant B, Sari-Sarraf H, Wachtel M, Long LR, Antani SK. Fast GPU-based segmentation of H&E stained squamous epithelium from multi-gigapixel tiled virtual slides [Poster]. Proc. SPIE 8676, Medical Imaging 2013: Digital Pathology, 86760X (March 29, 2013); doi:10.1117/12.2007800
  • Harris AK, Meyerson JR, Matsuoka Y, Kuybeda O, Moran A, Bliss D, Das SR, Yewdell JW, Sapiro G, Subbarao K, Subramaniam S. Structure and accessibility of HA trimers on intact 2009 H1N1 pandemic influenza virus to stem region-specific neutralizing antibodies. Proc Natl Acad Sci U S A. 2013 Mar 19;110(12):4592-7. doi: 10.1073/pnas.1214913110. Epub 2013 Mar 4.
  • You D, Rahman MM, Antani SK, Demner-Fushman D, Thoma GR. Text- and content-based biomedical image modality classification. Proc. SPIE Medical Imaging. Orlando, FL. February 2013;8674-21.
  • Tran EEH, Kuybeda O, Bartesaghi A, Milne JLS, Subramaniam S. Binding of Neutralizing Antibodies Results in Distinct Quaternary Conformations of Trimeric HIV-1 Envelope Glycoproteins. Biophysical Society 57th Annual Meeting; 2013 Feb 2-6; Philadelphia.
  • You D, Simpson M, Antani SK, Demner-Fushman D, Thoma GR. A robust pointer segmentation in biomedical images toward building a visual ontology for biomedical article retrieval. Proc. SPIE 8658, Document Recognition and Retrieval XX, 86580Q (February 4, 2013); doi:10.1117/12.2005934.
  • You D, Simpson M, Antani SK, Demner-Fushman D, Thoma GR. Annotating image ROIs with text descriptions for multimodal biomedical document retrieval. Proc. SPIE 8658, Document Recognition and Retrieval XX, 86580Q (February 4, 2013); doi:10.1117/12.2005934; http://dx.doi.org/10.1117/12.2005934.
  • Kuybeda O, Frank GA, Bartesaghi A, Borgnia M, Subramaniam S, Sapiro G. A collaborative framework for 3D alignment and classification of heterogeneous subvolumes in cryo-electron tomography. J Struct Biol. 2013 Feb;181(2):116-27. doi: 10.1016/j.jsb.2012.10.010. Epub 2012 Oct 27.
  • Harris AK, Meyerson JR, Matsuoka Y, Kuybeda O, Moran A , Bliss D, Das SR, Yewdell J, Sapiro G, Subbarao K, Subramaniam S. Molecular Structures of Native HA Trimers on 2009 H1N1 Pandemic Influenza Virus Complexed with Neutralizing Antibodies. Biophysical Journal. 2013 Jan 29;104(2 Supp 1):414a. 57th Annual Meeting of the Biophysical Society; 2013 Feb 2-6; Philadelphia. DOI: http://dx.doi.org/10.1016/j.bpj.2012.11.2310.
  • Meyerson JR, Tran EE, Kuybeda O, Chen W, Dimitrov DS, Gorlani A, Verrips T, Lifson JD, Subramaniam S. Molecular structures of trimeric HIV-1 Env in complex with small antibody derivatives. Proc Natl Acad Sci U S A. 2013 Jan 8;110(2):513-8. doi: 10.1073/pnas.1214810110. Epub 2012 Dec 24.
  • Ackerman MJ. Computer briefs: privacy, M-health, and social media. J Med Pract Manage. 2013 Jan-Feb;28(4):264-5.
  • Locatis CN, Ackerman MJ. Three principles for determining the relevancy of store-and-forward and live interactive telemedicine: reinterpreting two telemedicine research reviews and other research. Telemed J E Health. 2013 Jan;19(1):19-23. doi: 10.1089/tmj.2012.0063. Epub 2012 Nov 27.
  • Pearson G, Gill MJ. An Evaluation of Motion JPEG 2000 for Video Archiving. Proc. Archiving 2005. Washington, D.C. April 2005:237-43.
  • Sarmiento RF, Liu F, Fontelo P. A Cross-Language Mobile Resource for Accessing MEDLINE/PubMed Based on an Open-Source, Crowdsourced Controlled Medical Vocabulary for the Philippines. Journal of Mobile Technology in Medicine. 2012 Dec;1:4S:28. DOI: 10.7309/jmtm.50.
  • Locatis CN, Conde JG, Bhagwat MA. A Hands-on Distance Learning Strategy to Increase Access to Bioinformatics Training [Poster]. Research Centers in Minority Institutions (RCMI): 13th RCMI International Symposium on Health Disparities; 2012 Dec 9-13; San Juan, Puerto Rico.
  • Pearson G, Gill MJ, Antani SK, Neve L, Miernicki G, Phichaphop K, Kanduru A, Jaeger S, Thoma GR. The Role of Location For Family Reunification During Disasters. HealthGIS 2012. Redondo Beach, CA. November 2012.
  • Candemir S, Jaeger S, Palaniappan K, Antani SK, Thoma GR. Graph Cut Based Automatic Lung Boundary Detection in Chest Radiographs. 1st Annual IEEE Healthcare Innovation Conference of the IEEE EMBS Houston, Texas USA, 7 - 9 November, 2012.
  • Fontelo P, Liu F. An Analysis of "PubMed for Handhelds" Server Utilization [Poster]. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2012 Nov 3-7; Chicago. p. 1736.
  • Gavino A, Marcelo A, Isip-Tan IT, Apostol-Nicodemus L, Mesa-Gaerlan FJ, Firaza PN, Faustorilla JF Jr., Fontelo P. Email2MEDLINE Use by Rural Health Physicians in Remote Areas of the Philippines [Poster]. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2012 Nov 3-7; Chicago. p. 1746.
  • Liu F, Fontelo P, Gavino A. ClinicalTrials and DailyMed Links from Translational Science Search [Poster]. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2012 Nov 3-7; Chicago. p. 1841.
  • Marcelo A, Isip-Tan IT, Apostol-Nicodemus L, Mesa-Gaerlan FJ, Firaza PN, Faustorilla JF Jr., Gavino A, Fontelo P. Use of Tablet Computers at the Point-of-Care: A Case Study from the Philippines [Poster]. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2012 Nov 3-7; Chicago. p. 1853.
  • Sheets L, Gavino A, Liu F, Fontelo P. Usability of Selected Databases for Low-Resource Clinical Decision Support [Poster]. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2012 Nov 3-7; Chicago. p. 1939.
  • Yoo TS, Bliss D, Lowekamp B, Chen D, Murphy GE, Narayan K, Hartnell LM, Do T, Subramaniam S. Visualizing cells and humans in 3D: Biomedical image analysis at nanometer and meter scales. IEEE Computer Graphics and Applications. 2012 Sep-Oct;32(5):39-49. DOI: 10.1109/MCG.2012.68.
  • Jaeger S, Karargyris A, Antani SK, Thoma GR. Automatic Screening For Lung Diseases In Chest Radiographs: a Global Health Initiative [Poster].. NIH Research Festival. October 2012.
  • Caban JJ, Rosebrock A, Yoo TS. Automatic identification of prescription drugs using shape distribution models. In: 19th IEEE International Conference on Image Processing (ICIP); 2012 Sep 30-Oct 3; Lake Buena Vista, Florida. p. 1005-8. DOI: 10.1109/ICIP.2012.6467032
  • Borovikov E. FaceMatch: visual search for pictures of missing persons during a disaster event. NIH Research Festival. October 2012.
  • Jaeger S. An information-theoretic neural model based on concepts in Chinese medicine. 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW).
  • Simpson M, You D, Rahman MM, Demner-Fushman D, Antani SK, Thoma GR. ITI's participation in the ImageCLEF 2012 medical retrieval and classification tasks. CLEF 2012 Working Notes. Rome, Italy. September 2012.
  • Sheets L, Callaghan F, Gavino A, Liu F, Fontelo P. Usability of selected databases for low-resource clinical decision support. Applied Clinical Informatics. 2012;3(3):326-33. DOI: http://dx.doi.org/10.4338/ACI-2012-06-RA-0024.
  • He L, Long LR, Antani SK, Thoma GR. Histology image analysis for carcinoma detection and grading. Comput Methods Programs Biomed. 2012 Sep;107(3):538-56. doi: 10.1016/j.cmpb.2011.12.007. Epub 2012 Mar 20.
  • Jaeger S, Karargyris A, Antani SK, Thoma GR. Detecting tuberculosis in radiographs using combined lung masks. 34th Int. Conf. of the IEEE Engineering in Medicine & Biology Society (EMBC). San Diego, CA. August 2012:4978-4981. doi: 10.1109/EMBC.2012.6347110.
  • Thoma G, Antani SK, Gill MJ, Pearson G, Neve L. People Locator: A System for Family Reunification IT Professional Volume 14 Issue 3, May 2012 Pages 13-21 DOI: 10.1109/MITP.2012.25
  • Liu J, Subramanian K, Yoo TS. A Phantom Design for Validating Colonoscopy Tracking. Proc. SPIE 8315, Medical Imaging 2012: Computer-Aided Diagnosis, 83151N (23 February 2012); doi: 10.1117/12.912395; http://dx.doi.org/10.1117/12.912395
  • Armstrong K, Liu F, Seymour A, Mazhani L, Littman-Quinn R, Fontelo P, Kovarik C. Evaluation of txt2MEDLINE and development of short messaging service-optimized, clinical practice guidelines in Botswana. Telemed J E Health. 2012 Jan-Feb;18(1):14-7. doi: 10.1089/tmj.2011.0014. Epub 2011 Dec 7.
  • Fontelo P, Faustorilla J, Gavino A, Marcelo A. Digital pathology - implementation challenges in low-resource countries. Anal Cell Pathol (Amst). 2012;35(1):31-6. doi: 10.3233/ACP-2011-0024.
  • Tran EE, Borgnia MJ, Kuybeda O, Schauder DM, Bartesaghi A, Frank GA, Sapiro G, Milne JL, Subramaniam S. Structural mechanism of trimeric HIV-1 envelope glycoprotein activation. PLoS Pathog. 2012;8(7):e1002797. doi: 10.1371/journal.ppat.1002797. Epub 2012 Jul 12.
  • Xue Z, Antani SK, Long LR, Demner-Fushman D, Thoma GR. Window classification of brain CT images in biomedical articles. AMIA Annu Symp Proc. 2012;2012:1023-9. Epub 2012 Nov 3.
  • Fontelo P. Consensus abstracts for evidence-based medicine. Evid Based Med. 2011 (Editor’s choice);16:36-38.
  • Fontelo P, Liu F. Finding translational science publications in MEDLINE/PubMed with translational science filters. Clin Transl Sci. 2011 Dec;4(6):455-9. doi: 10.1111/j.1752-8062.2011.00320.x. Epub 2011 Nov 7.
  • Locatis CN, Williamson D, Sterrett J, Detzler I, Ackerman MJ. Video medical interpretation over 3G cellular networks: a feasibility study. Telemed J E Health. 2011 Dec;17(10):809-13. doi: 10.1089/tmj.2011.0084. Epub 2011 Oct 19.
  • Meyerson JR, White TA, Bliss D, Moran A, Bartesaghi A, Borgnia MJ, de la Cruz JV, Schauder D, Hartnell LM, Nandwani R, Dawood M, Kim B, Kim JH, Sununu J, Yang L, Bhatia S, Subramaniam C, Hurt DE, Gaudreault L, Subramaniam S. Determination of molecular structures of HIV envelope glycoproteins using cryo-electron tomography and automated sub-tomogram averaging. J Vis Exp. 2011 Dec 1;(58). pii: 2770. doi: 10.3791/2770.
  • Murphy GE, Narayan K, Lowekamp B, Hartnell LM, Heymann JA, Fu J, Subramaniam S. Correlative 3D imaging of whole mammalian cells with light and electron microscopy. J Struct Biol. 2011 Dec;176(3):268-78. doi: 10.1016/j.jsb.2011.08.013. Epub 2011 Sep 1.
  • Fontelo P. Can journal abstracts alone be used for clinical decision making [Letter]? BMJ. 2011 Nov 2.
  • Gavino AI, Ho BLC, Wee PAA, Marcelo AB, Fontelo P. Information-seeking practices of medical professionals and students in low and middle income countries. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2011 Oct 22-26; Washington DC. p. 1780.
  • Liu F, Fontelo P. Using Social Networking Resources to Search MEDLINE/PubMed, a Practice Guidelines Database and Journal Club. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2011 Oct 22-26; Washington DC. p. 1864.
  • Rahman MM, Antani SK, Thoma GR. A Query Expansion Framework in Image Retrieval Domain Based on Local and Global Analysis. Inf Process Manag. 2011 Sep 1;47(5):676-691.
  • Ackerman MJ, Locatis CN. Advanced networks and computing in healthcare. J Am Med Inform Assoc. 2011 Jul-Aug;18(4):523-8. doi: 10.1136/amiajnl-2010-000054. Epub 2011 Apr 12.
  • Rahman MM, Antani SK, Thoma GR. A learning-based similarity fusion and filtering approach for biomedical image retrieval using SVM classification and relevance feedback. IEEE Trans Inf Technol Biomed. 2011 Jul;15(4):640-6. doi: 10.1109/TITB.2011.2151258. Epub 2011 Jun 16.
  • Caban JJ, Rheingans P, Yoo TS. An Evaluation of Visualization Techniques to Illustrate Statistical Deformation Models. Computer Graphics Forum. 2011 May-Jun;30(3):821-30. doi:10.1111/j.1467-8659.2011.01931.x.
  • Caban JJ, Yao J, Mollura DJ, Liao D, Yoo TS. Enhancing image analytic tools by fusing quantitative physiological values with image features. In: SIIM [Society for Imaging Informatics in Medicine] 2011 Scientific Abstract Book. SIIM Annual Meeting Learning Track 1 Scientific Sessions: Advanced Visualization: Making Advanced Visualization Tools Work for You; 2011 Jun 2-5; Washington DC/National Harbor, Maryland.
  • Xue Z, Long LR, Antani SK, Thoma GR. Spine x-ray image retrieval using partial vertebral boundaries. 24th International Symposium on Computer-Based Medical Systems. Bristol, UK. June 2011.
  • Jaeger S, Antani S, Thoma GR. Tuberculosis Screening of Chest Radiographs. 2 June 2011, SPIE Newsroom. DOI: 10.1117/2.1201105.003732i.
  • Gururajan A, Kamalakannan S, Sari-Sharraf H, Shahriar M, Long LR, Antani SK. On the creation of a segmentation library for digitized cervical and lumbar spine radiographs. Comput Med Imaging Graph. 2011 Jun;35(4):251-65. doi: 10.1016/j.compmedimag.2010.11.006. Epub 2011 Mar 5.
  • Liu WL, Zhang K, Locatis CN, Ackerman MJ. Internet-based videoconferencing coder/decoders and tools for telemedicine. Telemed J E Health. 2011 Jun;17(5):358-62. doi: 10.1089/tmj.2010.0193. Epub 2011 May 12.
  • Locatis CN, Williamson D, Gould-Kabler C, Zone-Smith L, Detzler I, Roberson J, Maisiak R, Ackerman MJ. In-Person, Video, and Telephonic Medical Interpretation. American Telemedicine Association 16th Annual International Meeting; 2011 May 1-3; Tampa, Florida.
  • Yoo TS, Hamilton T, Hurt D, Caban J, Liao D, Chen D. Toward Quantitative X-Ray CT Phantoms of Metastatic Tumors Using Rapid Prototyping Technology. In: Pan X, Liebling M, editors. Proceedings of ISBI 2011: IEEE Computer Society International Symposium on Biomedical Imaging: From Nano to Macro; 2011 Mar 30-Apr 2; Chicago. p. 1770-3. DOI: 10.1109/ISBI.2011.5872749.
  • Locatis CN, Berner ES, Hammack G, Smith S, Maisiak R, Ackerman MJ. Communication and proximity effects on outcomes attributable to sense of presence in distance bioinformatics education. BMC Med Educ. 2011 Mar 14;11:10. doi: 10.1186/1472-6920-11-10.
  • Butan C, Hartnell LM, Fenton AK, Bliss D, Sockett RE, Subramaniam S, Milne JL. Spiral architecture of the nucleoid in Bdellovibrio bacteriovorus. J Bacteriol. 2011 Mar;193(6):1341-50. doi: 10.1128/JB.01061-10. Epub 2010 Dec 10.
  • Antani S, Xue Z, Long LR, Bennett D, Ward S, Thoma GR. Is there a need for biomedical CBIR systems in clinical practice? Outcomes from a usability study. Proceedings of SPIE Medical Imaging 2011: Advanced PACS-based Imaging Informatics and Therapeutic Applications. Orlando, FL. February 2011;7967:796708.
  • Caban JJ, Liao D, Yao J, Mollura DJ, Gochuico B, Yoo TS. Enhancing image classification models with multimodal biomarkers. In: Summers RM, van Ginneken B, editors. Proceedings of SPIE Medical Imaging 2011: Computer-Aided Diagnosis; 2011 Feb 12-17; Lake Buena Vista (Orlando area), Florida;7963:9 pages. DOI: 10.1117/12.878084.
  • Liu J, Subramanian KR, Yoo TS. Temporal Volume Flow: An Approach to Tracking Failure Recovery. In: Summers RM, van Ginneken B, editors. Proceedings of SPIE Medical Imaging 2011: Computer-Aided Diagnosis; 2011 Feb 12-17; Lake Buena Vista, Florida;7963. SPIE; 2011 Mar 4. DOI: 10.1117/12.878220.
  • Mann D, Caban JJ, Stolka PJ, Boctor EM, Yoo TS. Multidimensional transfer functions for effective visualization of streaming ultrasound and elasticity images. In: Wong KH, Holmes DR III, editors. Proceedings of SPIE Medical Imaging 2011: Visualization, Image-Guided Procedures, and Modeling; 2011 Feb 12-17; Lake Buena Vista, Florida;7964:1-8. DOI:10.1117/12.878935.
  • He L, Long LR, Antani S, Thoma GR. Distribution Fitting-based Pixel Labeling For Histology Image Segmentation Proceedings of SPIE Medical Imaging 2011. February 2011
  • Karargyris A, Antani SK, Thoma GR. Segmenting anatomy in chest x-rays for tuberculosis screening. Conf Proc IEEE Eng Med Biol Soc. 2011;2011:7779-82. doi: 10.1109/IEMBS.2011.6091917.
  • Gavino AI, Tolentino PA, Bernal AB, Fontelo P, Marcelo AB. A Telemedicine Program Utilizing Short Message Service (SMS) for Remote Village Doctors. Mobile eHealth solutions for Developing Countries, International Telecommunication Union. 2010:94-98.
  • Xue Z, Long LR, Antani SK, Neve L, Zhu Y, Thoma GR. A unified set of analysis tools for uterine cervix image segmentation. Comput Med Imaging Graph. 2010 Dec;34(8):593-604. doi: 10.1016/j.compmedimag.2010.04.002. Epub 2010 May 26.
  • Banez RJ, Fontelo P, Marcelo AB, Liu F. QRefer: Using 2D-Barcode Technology for Patient Referral Systems. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2010 Nov 13-17; Washington DC. p. 975.
  • Fontelo P, Liu F, Banez RJ. Mobile Devices, Smartphones and ‘PubMed for Handhelds’. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2010 Nov 13-17; Washington DC. p. 1044.
  • Kovarik C, Fontelo P, Liu F, Armstrong K, Littman-Quinn R, Banez R, Seymour A, Shih T, Mazhani L. txt2MEDLINE and SMS Practice Guidelines for Clinicians in Botswana. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2010 Nov 13-17; Washington DC. p. 1043.
  • Olson R, James E, Fontelo P. Information access trends among clinicians at a community hospital in northeast Georgia. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2010 Nov 13-17; Washington DC. p. 975.
  • Xue Z, Antani SK, Long LR, Thoma GR. An online segmentation tool for cervicographic image analysis. ACM International Health Informatics Symposium, IHI 2010, Arlington, VA, USA, November 11 - 12, 2010, Proceedings; 01/2010.
  • Fontelo P, Liu F. Are Consensus MEDLINE Abstracts Useful For Guiding Clinical Decisions? Evidence 2010 -- Transforming Healthcare; 2010 Nov 1-2; BMA House, London.
  • Xue Z, Long LR, Antani SK, Thoma GR. Automatic Extraction of Mosaic Patterns In Uterine Cervix Images 23rd IEEE International Symposium on Computer-Based Medical Systems (CBMS) 2010. Perth, Australia. October 2010:273-8.
  • Ducut E, Liu F, Avila JM, Encinas MA, Diwa M, Fontelo P. Virtual Microscopy in a Developing Country: A Collaborative Approach to Building an Image Library. Journal of eHealth Technology and Application. 2010 Sep;8(2):112-5.
  • Ceccarelli MA, Curioso WH, Liu F, Fontelo P. Do machine translations increase the usefulness of summaries of MEDLINE abstracts? A preliminary study with medical students and physicians in Peru. In: Stud Health Technol Inform [Studies in Health Technology and Informatics] -- MEDINFO 2010: Proceedings of the 13th World Congress on Medical and Health Informatics; 2010 Sep 12-15; Cape Town, South Africa;160:1414.
  • He L, Long LR, Antani SK, Thoma GR. Local and Global Gaussian Mixture Models For Hematoxylin and Eosin Stained Histology Image Segmentation 20th International Conference on Hybrid Intelligence Systems. Atlanta, GA. August 2010:223-8
  • Murphy GE, Lowekamp B, Zerfas PM, Chandler RJ, Narasimha R, Venditti CP, Subramaniam S. Ion-abrasion scanning electron microscopy reveals distorted liver mitochondrial morphology in murine methylmalonic acidemia. J Struct Biol. 2010 Aug;171(2):125-32. doi: 10.1016/j.jsb.2010.04.005. Epub 2010 Apr 23.
  • Cheng B, Stanley RJ, Antani SK, Thoma GR. A Novel Computational Intelligence-based Approach For Medical Image Artifacts Detection Proceedings of the 2010 International Conference on Artificial Intelligence and Pattern Recognition. Orlando, FL. July 2010:113-20
  • Felts RL, Narayan K, Estes JD, Shi D, Trubey CM, Fu J, Hartnell LM, Ruthel GT, Schneider DK, Nagashima K, Bess JW Jr, Bavari S, Lowekamp B, Bliss D, Lifson JD, Subramaniam S. 3D visualization of HIV transfer at the virological synapse between dendritic cells and T cells. Proc Natl Acad Sci U S A. 2010 Jul 27;107(30):13336-41. doi: 10.1073/pnas.1003040107. Epub 2010 Jul 12.
  • Rahman MM, Antani SK, Thoma GR. Local Concept-Based Medical Image Retrieval With Correlation-Enhanced Similarity Matching Based On Global Analysis IEEE Computer Society Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA10) in conjunction with IEEE International Conference on Computer Vision and Pattern Recognition (CVPR) 2010. June 2010:87-94
  • Caban JJ, Rheingans P, Yoo TS. An MRF-based Statistical Deformation Model for Morphological Image Analysis. IEEE Computer Society Workshop on Mathematical Models in Biomedical Image Analysis (MMBIA); 2010 Jun 14; San Francisco:31-8.
  • Lowekamp B, Chen D. A Streaming IO Base Class and Support for Streaming the MRC and VTK File Format. Insight Journal. Web. 2010 Jun 9.
  • Kamalakannan S, Gururajan A, Sari-Sarraf H, Long LR, Antani SK. Double-edge detection of radiographic lumbar vertebrae images using pressurized open DGVF snakes. IEEE Trans Biomed Eng. 2010 Jun;57(6):1325-34. doi: 10.1109/TBME.2010.2040082. Epub 2010 Feb 17.
  • Qian X, Tagare HD, Fulbright RK, Long LR, Antani SK. Optimal embedding for shape indexing in medical image databases. Med Image Anal. 2010 Jun;14(3):243-54. doi: 10.1016/j.media.2010.01.001. Epub 2010 Jan 20.
  • Armstrong K, Liu F, Seymour A, Rahman M, Fontelo P, Kovarik C. Design and Evaluation of txt2MEDLINE and SMS Optimized, Searchable Clinical Guidelines for Clinicians in Botswana. Telemedicine J E Health;16(S1):S-93. American Telemedicine Association 15th Annual International Meeting and Exposition; 2010 May 16-18; San Antonio, Texas.
  • Banez RJ, Sarmiento R, Marcelo A, Fontelo P, Du B. An SMS Appointment Reminder System for Prenatal Care in Urban Health Care Centers in the Philippines. Telemed J E Health;16(S1):S-38. American Telemedicine Association 15th Annual International Meeting and Exposition; 2010 May 16-18; San Antonio, Texas.
  • Chen D, Chittajallu DR, Passalis G, Kakadiaris IA. Computational tools for quantitative breast morphometry based on 3D scans. Ann Biomed Eng. 2010 May;38(5):1703-18. doi: 10.1007/s10439-010-9971-z. Epub 2010 Mar 19.
  • Locatis C, Williamson D, Gould-Kabler C, Zone-Smith L, Detzler I, Roberson J, Maisiak R, Ackerman MJ. Comparing in-person, video, and telephonic medical interpretation. J Gen Intern Med. 2010 Apr;25(4):345-50. doi: 10.1007/s11606-009-1236-x. Epub 2010 Jan 27.
  • Guan H, Antani S, Long LR, Thoma GR. Minimizing the Semantic Gap In Biomedical Content-based Image Retrieval Proc SPIE, Medical Imaging: Advanced PACS-based Imaging Informatics, and Therapeutic Applications. March 2010;7628:762807-1 ~ 762807-8
  • Kim E, Huang X, Tan G, Long LR, Antani S. A Hierarchical SVG Image Abstraction Layer for Medical Imaging Medical Imaging 2010: Advanced PACS-based Imaging Informatics and Therapeutic Applications. San Diego, California. March 2010;7628
  • Xue Z, Antani S, Long LR, Thoma GR. Web-accessible Cervigram Automatic Segmentation Tool SPIE Medical Imaging Conference. March 2010;7628
  • Liu J, Subramanian K, Yoo TS. Accurate motion parameter estimation for colonoscopy tracking using a regression method. In: Karssemeijer N, Summer RM, editors. Proceedings of SPIE Medical Imaging 2010: Computer-Aided Diagnosis; 2010 Feb 13-18; San Diego;7624:11 pages. DOI: 10.1117/12.844433.
  • Locatis C, Berner ES, Hammack G, Smith S, Maisiak R, Ackerman MJ. An exploratory study of co-location as a factor in synchronous, collaborative medical informatics distance education. BMC Res Notes. 2010 Feb 2;3:30. doi: 10.1186/1756-0500-3-30.
  • Ackerman MJ, Filart R, Burgess LP, Lee I, Poropatich RK. Developing next-generation telehealth tools and technologies: patients, systems, and data perspectives. Telemed J E Health. 2010 Jan-Feb;16(1):93-5. doi: 10.1089/tmj.2009.0153.
  • Liu J, Subramanian K, Yoo TS. Region flow: a multi-stage method for colonoscopy tracking. Med Image Comput Comput Assist Interv. 2010;13(Pt 2):505-13.
  • Lowekamp B, Chen D. A Framework for Improved Regression Testing Based Upon CTest and CDash. The Insight Journal. Web. 2009 Jul-Dec.
  • Fontelo P, Liu F. A novel tool for translational research discovery. Clin Transl Sci. 2009 Dec;2(6):391. doi: 10.1111/j.1752-8062.2009.00139.x.
  • Ducut E, Liu F, Quion N, Fontelo P. TB-SMS: A Short Messaging Service (SMS) Medication Reminder Application for DOTS. AMIA Annu Symp Proc; 2009 Nov 14-18; San Francisco. p. 827.
  • Encinas MA, Ducut E, Liu F, Avila JM, Diwa M, Fontelo P. Development of a Virtual Slide Library in a Developing Country. AMIA Annu Symp Proc; 2009 Nov 14-18; San Francisco. p. 836.
  • Fontelo P, Liu F. Consensus TBL Summaries for Clinical Decision-making. AMIA Annu Symp Proc; 2009 Nov 14-18; San Francisco. p. 846.
  • Fontelo P, Liu F, Cravedi K. Found in Translation: Tracking and Tagging Translational Research. AMIA Annu Symp Proc. 2009 Nov 14-18; San Francisco. p. 823.
  • Kasiviswanathan K, Fontelo P. Connecting the OLPC: a Model for Developing Countries. AMIA Annu Symp Proc; 2009 Nov 14-18; San Francisco. p. 904.
  • Yoo TS, Silver D, Correa C, Chen D, Moran A. Volumetric Bodies - the Exhibition. IEEE VisWeek 2009 Interactive Demo & Art Exhibit; 2009 Oct 12-16; Atlantic City, New Jersey.
  • Bennett AE, Narayan K, Shi D, Hartnell LM, Gousset K, He H, Lowekamp BC, Yoo TS, Bliss D, Freed EO, Subramaniam S. Ion-abrasion scanning electron microscopy reveals surface-connected tubular conduits in HIV-infected macrophages. PLoS Pathog. 2009 Sep;5(9):e1000591. doi: 10.1371/journal.ppat.1000591. Epub 2009 Sep 25.
  • Xu X, Lee DJ, Antani SK, Long LR, Archiband JK. Using Relevance Feedback with Short-term Memory for Content-based Spine X-ray Image Retrieval. J Neurocomputing. June 2009;72(10-12):2259-69.
  • Lowekamp B. IO Streaming in ITK. Kitware Source. 2009 Apr;9:5-7.
  • Xue Z, Long LR, Antani SK, Jeronimo J, Thoma GR. Image-retrieval System Aids Cervical Cancer Studies SPIE Newsroom. April 2009
  • Gordon S, Lotenberg S, Long LR, Antani SK, Jeronimo J, Greenspan H. Evaluation of uterine cervix segmentations using ground truth from multiple experts. Comput Med Imaging Graph. 2009 Apr;33(3):205-16. doi: 10.1016/j.compmedimag.2008.12.002. Epub 2009 Feb 13.
  • Heymann JAW, Shi D, Kim S, Bliss D, Milne JLS, Subramaniam S. 3D imaging of mammalian cells with ion-abrasion scanning electron microscopy. J Struct Biol. 2009 Apr;166(1):1-7. doi: 10.1016/j.jsb.2008.11.005. Epub 2008 Dec 10.
  • Greenspan H, Gordon S, Zimmerman G, Lotenberg S, Jeronimo J, Antani S, Long LR. Automatic Detection of Anatomical Landmarks In Uterine Cervix Images IEEE Trans Med Imaging. 2009 Mar;28(3):454-68
  • Xue Z, Long LR, Antani SK, Jeronimo J, Thoma GR. Segmentation of Mosaicism in Cervicographic Images Using Support Vector Machines Proc. SPIE 7259, Medical Imaging 2009, Lake Buena Vista, Florida, United States: Image Processing, 72594X (27 March 2009); doi: 10.1117/12.812318; http://dx.doi.org/10.1117/12.812318.
  • Deserno TM, Long LR, Greenspan H. Content-based Image Retrieval: Major Challenges for Biomedical Applications Intl Journal of Healthcare Information Systems and Informatics. January 2009;4(1):i-iii
  • Locatis C, Gaines C, Liu W, Gill MJ. Extending a Blended Education Programme to Native American High School Students in Alaska. J Vis Commun Med. 2009 Jan;32(1):8-13.
  • You D, Apostolova E, Antani SK, Demner-Fushman D, Thoma GR. Figure content analysis for improved biomedical article retrieval. Proceedings of IS&T/SPIE Electronic Imaging, 2009, San Jose, California, United States, Document Recognition and Retrieval XVI; 72470V (2009), 1-10; doi: 10.1117/12.805976
  • Long LR, Antani SK, Deserno TM, Thoma GR. Content-based Image Retrieval in Medicine: Retrospective Assessment, State of the Art, and Future Directions Int J Healthc Inf Syst Inform. 2009 Jan 1;4(1):1-16
  • Du H, Yoo TS, Qin H. PDE-based medial axis extraction and shape manipulation of arbitrary meshes. Journal of Systems Science and Complexity. 2008 Dec;21(4):601-17.
  • Fontelo P, Liu F, Zhang K, Ackerman MJ. Extending the benefits of one laptop per child to health. BMJ. 2008 Dec 1;337:a2459. doi: 10.1136/bmj.a2459.
  • Bernal AB, Tolentino PA, Gavino AI, Fontelo P, Marcelo AB. Nursing informatics: challenges to Philippine nursing curriculum. AMIA Annu Symp Proc; 2008 Nov 8-12; Washington DC. p. 876.
  • Ducut EG, Liu F, Fontelo P. The Cost of Being Wireless: A Usage Analysis of the PubMed for Handhelds Portal at the Point-of-Care. AMIA Annu Symp Proc; 2008 Nov 8-12; Washington DC. p. 936.
  • Fontelo P, Liu F, Ducut EG. QR Code for Medical Information Uses. AMIA Annu Symp Proc; 2008 Nov 8-12; Washington DC. p. 945.
  • Fontelo P, Liu F, Zhang K, Ackerman MJ, Tolentino H. The one laptop per Child (OLPC) computer for health clinics in developing countries. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2008 Nov 8-12; Washington DC. p. 192-6.
  • Hensel BK, Fontelo P. Physician Attitudes Toward SMS/Text Messaging in Medicine. AMIA Annu Symp Proc; 2008 Nov 8-12; Washington DC. p. 965.
  • Mahmoud MA, Al-Khafaji JT, Al-Shorbaji N, Sara K, Al-Ubaydli M, Ghazzaoui R, Liu F, Fontelo P. BabelMeSH and PICO Linguist in Arabic. AMIA Annu Symp Proc; 2008 Nov 8-12; Washington DC. p. 944.
  • Gavino AI, Tolentino PA, Bernal AB, Fontelo P, Marcelo AB. Telemedicine via Short Messaging System (SMS) in Rural Philippines. AMIA Annu Symp Proc; 2008 Nov 8-12; Washington DC. p. 952.
  • Pearson G, Gill M, Thoma G. Web screening of US nursing homes by location and quality. AMIA Annu Symp Proc. 2008 Nov 6:576-80.08:576-80.
  • Cheng W, Pearson G. Algorithm Developed To Make More Reliable Links To Better Photographic Views of Nursing Homes For Prototype "Nursing Home Screener" Web Site. Poster Section III at NIH Research Festival (TECH-3). National Institutes of Health October 2008. Bethesda, MD. October 2008.
  • Ducut E, Fontelo P. Mobile Devices in Health Education: Current Use and Practice. J Computing in Higher Education; Fall 2008; 20(2):59-68. Published online 2008 Oct 23. DOI: 10.1007/s12528-008-9003-2.
  • Jeronimo J, Wentzensen N, Long R, Schiffman M, Dunst ST, Allen RA, Walker JL, Gold MA, Zuna RE, Sherman ME, Wacholder S, Wang SS. Evaluation of Linear Array Human Papillomavirus Genotyping Using Automatic Optical Imaging Software J Clin Microbiol. 2008 Aug;46(8):2759-65. Epub 2008 Jun 11
  • Seetharaman S, Stanley RJ, De S. Live Wire Segmentation Tool for Osteophyte Detection in Lumbar Spine X-Ray Images Proc IEEE ICETET 2008. Nagpur, India. July 2008:715-20
  • Locatis CN, Berner E, Matthews P, Hammack G, Smith S, Maisiak R. Is Student Collocation a Factor in Synchronous Distance Education? International Assoc of Medical Science Educators Annual Meeting; 2008 Jul 25-29; Salt Lake City.
  • Sneiderman C, Fontelo P, Ackerman MJ. XO Computer Application to Medical Science Education. J International Assoc of Medical Science Educators: Special Issue Poster Abstracts of the 12th IAMSE Annual Meeting (2008 Jul 25-29; Salt Lake City);18(supplement 2):100.
  • Antani S, Long LR, Thoma GR. Bridging the Gap: Enabling CBIR in Medical Applications Proc IEEE CBMS. Jyvaskyla, Finland. June 2008:4-6
  • Chang Y, Antani S, Lee DJ, Gledhill K, Long LR, Christensen P. CBIR of Spine X-ray Images on Inter-vertebral Disc Space and Shape Profiles Proc IEEE CBMS. Jyvaskyla, Finland. June 2008:224-9.
  • Zhu Y, Huang X, Lopresti D, Long R et al. Web-based Multi-observer Segmentation Evaluation Tool Proc. 21st IEEE CBMS. Jyvaskyla, Finland. June 2008:167-9
  • Liu J, Subramanian K, Yoo T, Van Uitert R. A Stable Optic-flow Based Method for Tracking Colonoscopy Images. Proceedings of MMBIA 2008, the IEEE Computer Society Workshop on Mathematical Methods in Biomedical Image Analysis; 2008 Jun 23-28; Anchorage, Alaska. DOI: 10.1109/CVPRW.2008.4562990.
  • Felts RL, Bennett A, Shi D, Freed E, Lifson J, Lowekamp B, Yoo TS, Bliss D, Subramaniam S. 3D Imaging of HIV transmission and entry using electron tomography and ion-abrasion scanning electron microscopy. Three Dimensional Electron Microscopy: Technical Advances and Recent Breakthroughs in 3DEM. Gordon Research Conference; 2008 Jun 15-20; Lucca (Barga), Italy.
  • Ducut E, Liu F, Fontelo P. An Update on Uniform Resource Locator (URL) Decay in MEDLINE Abstracts and Measures for Its Mitigation. BMC Med Inform Decis Mak. 2008 Jun 11;8:23. DOI: 10.1186/1472-6947-8-23.
  • Demner-Fushman D, Antani SK, Simpson M, Thoma GR. Combining Medical Domain Ontological Knowledge and Low-level Image Features for Multimedia Indexing Procf OntoImage 2008, part of LREC 2008. Marrakech, Morrocco. May 2008:CDROM Proceedings
  • Zhu Y, Huang X, Wang W, Lopresti D, Long LR, Antani SA, Xue Z, Thoma GR. Balancing the Role of Priors in Multi-Observer Segmentation Evaluation J Signal Process Syst. 2008 May 28;55(1-3):185-207
  • Huang X, Wang W, Xue Z, Antani SK, Long LR, Jeronimo J. Tissue Classification using Cluster Features for Lesion Detection in Digital Cervigrams Proc. SPIE Medical Imaging 2008. April 2008;6914:69141Z-1-8
  • Xue Z, Long R, Antani SK, Thoma GR. A Web-accessible Content-based Cervicographic Image Retrieval System Proc SPIE Medical Imaging 2008. April 2008;6919:691907-1-9
  • Goedert JJ, Scoppio BM, Pfeiffer R, Neve L, Federici AB, Long LR, Dolan BM, Brambati M, Bellinvia M, Lauria C, Preiss L, Boneschi V, Whitby D, Brambilla L. Treatment of classic Kaposi sarcoma with a nicotine dermal patch: a phase II clinical trial. phase II clinical trial. J Eur Acad Dermatol Venereol. 2008 Sep;22(9):1101-9. doi: 10.1111/j.1468-3083.2008.02720.x. Epub 2008 Apr 1.r 1.
  • Locatis C, Vega A, Bhagwat M, Liu W, Conde J. A Virtual Computer Lab for Distance Biomedical Technology Education. BMC Med Educ. 2008 Mar 13;8:12. DOI: 10.1186/1472-6920-8-12.
  • Antani SK, Demner-Fushman D, Li J, Srinivasan BV, Thoma GR. Exploring Use of Images in Clinical Articles for Decision Support in Evidence-Based Medicine Proc. SPIE-IS/T Electronic Imaging. San Jose, CA. January 2008;6815:68150Q(1-10)
  • Stanley RJ, Antani S, Long LR, Thoma GR, Gupta K, Das M. Size-invariant Descriptors for Detecting Regions of Abnormal Growth in Cervical Vertebrae Comput Med Imaging Graph. 2008 Jan;32(1):44-52. Epub 2007 Oct 22
  • Xu X, Lee DJ, Antani S, Long LR. A Spine X-ray Image Retrieval System using Partial Shape Matching IEEE Trans Inf Technol Biomed. 2008 Jan;12(1):100-8.
  • Locatis C. Performance, Instruction, and Technology in Health Care Education. Chapter 20 in: Reiser RA, Dempsey JV, editors. Trends and Issues in Instructional Design and Technology. Upper Saddle River, New Jersey: Merrill/Prentice Hall; 2007 (second edition). p. 197-208.
  • Tolentino H, Kamadjeu R, Fontelo P, Liu F, et al. Scanning the Emerging Infectious Diseases Horizon - Visualizing ProMED Emails Using EpiSPIDER. Advances in Disease Surveillance. 2007;2:169.
  • Deserno TM, Antani SK, Long LR. Exploring Access to Scientific Literature Using Content-Based Image Retrieval Proc SPIE Medical Imaging 2007. Vol. 6516: 65160L-1-8.
  • Deserno TM, Antani SK, Long LR. Gaps in Content-Based Image Retrieval Proc SPIE Medical Imaging 2007. Vol. 6516: 65160J-1-11
  • Xue Z, Antani SK, Long LR, Thoma GR. Comparative Performance Analysis of Cervix ROI Extraction and Specular Reflection Removal Algorithms for Uterine Cervix Image Analysis Proc SPIE Medical Imaging 2007. Vol. 6512: 65124I-1-9
  • Hauser SE, Demner-Fushman D, Jacobs JL, Humphrey SM, Ford G, Thoma GR. Using Wireless Handheld Computers to Seek Information at the Point of Care: An Evaluation by Clinicians. J Am Med Inform Assoc. 2007 Nov-Dec;14(6):807-15. Epub 2007 Aug 21.
  • Conran R, Fontelo P, Liu F, Fontelo M, White E. Slide2Go: A Virtual Slide Collection for Pathology Education. AMIA Annu Symp Proc; 2007 Nov 10-14; Chicago. p. 918.
  • Fontelo P, Liu F, Muin M, Ducut E, Ackerman MJ, Paalan-Vasquez F. MMSPix - A Multimedia Messaging Service (MMS) Medical Images Weblog. AMIA Annu Symp Proc; 2007 Nov 10-14; Chicago. p. 956.
  • Tom O, Fontelo P, Liu F. Do Computer-generated Summaries, 'The Bottom Line (TBL)' Accurately Reflect Published Journal Abstracts? AMIA Annu Symp Proc; 2007 Nov 10-14; Chicago. p. 1135.
  • Demner-Fushman D, Antani S, Thoma GR. Automatically Finding Images for Clinical Decision Support Proc of IEEE DM-Med 2007. Omaha, NE, October 2007, pp. 139-144
  • Du H, Yoo TS. Visualizing Indexing Similarity Over the NLM Medical Subject Headings (MeSH). IEEE InfoVis [Information Visualization] 2007 Conference; 2007 Oct 28-30; Sacramento, California.
  • Xue Z, Antani S, Long LR, Jeronimo J, Thoma GR. Investigating CBIR Techniques for Cervicographic Images AMIA Annu Symp Proc. 2007 Oct 11:826-30.
  • Li J, Demner-Fushman D, Thoma GR. Localizing Text and Symbols in Images from Biomedical Journal Articles Poster at 20th NIH Research Festival (BIOINFO-6), September 2007, National Institutes of Health
  • Srinivasan B, Antani S, Demner-Fushman D, Thoma GR. Identification and Segmentation of Multi-Panel Images in Biomedical Journal Articles [Poster]. Poster at 20th NIH Research Festival (BIOINFO-1), September 2007, National Institutes of Health
  • Zhu Y, Long LR, Antani S, Xue Z, Thoma GR. Web-based STAPLE for Quality Estimation of Multiple Image Segmentations Poster at 20th NIH Research Festival (IMAG-12), September 2007, National Institutes of Health
  • Antani SK, Deserno TM, Long LR, Thoma GR. Geographically Distributed Complementary Content-Based Image Retrieval Systems for Biomedical Image Informatics Stud Health Technol Inform. 2007;129(Pt 1):493-7
  • Marcelo AB, Fontelo P. An Evaluation of the Usability of Accessing MEDLINE over Short Messaging System. In: Kuhn KA, Warren JR, Leong T-Y, editors. Stud Health Technol Inform [Studies in Health Technology and Informatics] -- MEDINFO 2007: Proceedings of the 12th World Congress on Health (Medical) Informatics -- Building Sustainable Health Systems; 2007 Aug 20-24; Brisbane, Australia:235-6. IOS Press.
  • Jeronimo J, Massad S, Castle PE, Schiffman M, NIH/ASCCP Research Group. Inter-observer Agreement in the Evaluation of Digitized Cervical Images Obstet Gynecol. Vol. 197, Issue 1, July 2007
  • Jeronimo J, Massad LS, Schiffman M for the NIH-ASCCP Research Group. Visual Appearance of the Uterine Cervix: Correlation with Human Papillomavirus Detection and Type Am J Obstet Gynecol. 2007 Jul;197(1):47.e1-8
  • Mao S, Mansukhani P, Thoma GR. Combining Static Classifiers and Class Syntax Models for Logical Entity Recognition in Scanned Historical Documents Proc IEEE CVPR, Minneapolis, Minnesota, June 2007, pp. 1-8.
  • Schardt C, Adams MB, Owens T, Jeitz S, Fontelo P. Utilization of the PICO Framework to Improve Searching PubMed for Clinical Questions. BMC Med Inform Decis Mak. 2007 Jun 15;7:16.
  • Lotenberg S, Gordon S, Long LR, Antani SK, Jeronimo J, Greenspan H. Automatic Evaluation of Uterine Cervix Segmentations Proc. SPIE Medical Imaging 2007. Vol. 6515: 65151J-1-12.
  • Srinivasan Y, Nutter BS, Mitra SD, Yang S, Phillips B, Long LR. Challenges in Automated Detection of Cervical Intraepithelial Neoplasia Proc SPIE Medical Imaging 2007. Vol. 6514: 65140F-1-11
  • Fontelo P, Liu F, Ackerman MJ. Potential Applications of RFID Technology in Medicine. Telemed J E Health. 2007 Apr;13(2):176-7.
  • Locatis C. Why Media Matter. Performance Improvement Quarterly. 2007 Mar;20(1):9-22. DOI: 10.1111/j.1937-8327.2007.tb00428.x.
  • Antani SK, Deserno TM, Long LR, Guld MO, Neve L, Thoma GR. Interfacing Global and Local CBIR Systems for Medical Image Retrieval Proc Workshop on Medical Imaging Research (Bildverarbeitung fur die Medizin). March 2007; 166-71.
  • Leon SA, Fontelo P, Green L, Ackerman MJ, Liu F. Evidence-based Medicine Among Internal Medicine Residents in a Community Hospital Program Using Smart Phones. BMC Medical Informatics and Decision Making. 2007 Feb 21;7:5. DOI: 10.1186/1472-6947-7-5.
  • Fontelo P, Liu F, Ackerman MJ. SMS (Short Message Service) for Medline/Pubmed Access at the Point-of Care. Telemed J E Health. 2006;12(2):237.
  • Johnson CR, Moorhead RM, Munzner TM, Pfister H, Rheingans P, Yoo TS. NIH-NSF Visualization Research Challenges Report. IEEE Press.
  • Demner-Fushman D, Hauser SE, Humphrey SM, Ford GM, Jacobs JL, Thoma GR. MEDLINE as a Source of Just-in-Time Answers to Clinical Questions. AMIA Annu Symp Proc. 2006:190-4.
  • Hauser SE, Demner-Fushman D, Ford GM, Jacobs JL, Thoma GR. Preliminary Comparison of Three Search Engines for Point of Care Access to MEDLINE Citations AMIA Annu Symp Proc. 2006:945
  • Fontelo P, Liu F, Ackerman MJ, Schardt CM, Keitz SA. askMEDLINE: a Report on a Year-long Experience. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2006 Nov 11-15; Washington DC. p. 923.
  • Fontelo P, Liu F, Muin M, Tolentino H, Ackerman MJ. Txt2MEDLINE: Text-Messaging Access to MEDLINE/PubMed. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2006 Nov 11-15; Washington DC. p. 259-63.
  • Liu F, Fontelo P, Ackerman MJ. BabelMeSH: Development of a Cross-Language Tool for MEDLINE/PubMed. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2006 Nov 11-15; Washington DC. p.1012.
  • Muin M, Fontelo P, Ackerman MJ. PubMed Interact: an Interactive Search Application for MEDLINE/PubMed. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2006 Nov 11-15; Washington DC. p. 1039.
  • Muin M, Fontelo P. Technical Development of PubMed Interact: an Improved Interface for MEDLINE/PubMed Searches. BMC Med Inform Decis Mak. 2006 Nov 3;6:36.
  • Locatis C, Gaines C, Liu W, Gill MJ, Carney J, Foster J, McCall V, Woods M. A Blended Training Approach Using Videoconferencing for Distance Education. J Med Libr Assoc. 2006 Oct;94(4):464-8.
  • Moorhead R, Johnson C, Munzner T, Pfister H, Rheingans P, Yoo TS. Visualization Corner: Visualization Research Challenges: A Report Summary. IEEE Computing in Science and Engineering. 2006 Jul-Aug;8(4):66-73. DOI: 10.1109/MCSE.2006.77.
  • Yoo TS, Rheingans P, Chen D, Olano M, Lowekamp B. Animated embroidery: a teapot in modern blackwork. ACM SIGGRAPH 2006 Teapot Exhibit entry; 2006 Jul 30-Aug 3; Boston.
  • Chen D, Morse BS, Lowekamp B, Yoo TS. Hierarchically partitioned implicit surfaces for interpolating large point set models. In: Kim M-S, Shimada K, editors. Advances in Geometric Modeling and Processing. Proceedings of the 4th international conference on Geometric Modeling and Processing (GMP'06); 2006 Jul 26-28; Pittsburgh, Pennsylvania. Lecture Notes in Computer Science 4077. Berlin: Springer-Verlag; 2006. p. 553-62.
  • Jeronimo J, Long R, Neve L, Ferris D, Noller K, Spitzer M, Mitra S, Guo J, Nutter B, Castle P, Herrero R, Rodriguez AC, Schiffman M. Preparing Digitized Cervigrams for Colposcopy Research and Education: Determination of Optimal Resolution and Compression Parameters J Low Genit Tract Dis. 2006 Jan;10(1):39-44
  • Long RL, Antani S, Jeronimo J, Schiffman M, Bopf M, Neve L, Cornwall C, Budihas SC, Thoma GR. Technology for Medical Education, Research, and Disease Screening by Exploitation of Biomarkers in a Large Collection of Uterine Cervix Images Proc CBMS 2006, June 2006, Salt Lake City, Utah; 826-31
  • Xu X, Lee DJ, Antani S, Long RL. Pre-Indexing for Fast Partial Shape Matching of Vertebrae Images Proc CBMS 2006, June 2006, Salt Lake City, Utah; 105-10
  • Yao J, Antani S, Long LR, Thoma GR, Zhang Z. Automatic Medical Image Annotation and Retrieval Using SECC Proc CBMS 2006, June 2006, Salt Lake City, Utah; 105-10
  • Ackerman MJ. Anatomy in the Digital Age. In: Rifkin BA, Ackerman MJ. Human Anatomy: From the Renaissance to the Digital Age. 2006 May 2. New York: Abrams. p. 318-329.
  • Benjamin A. Rifkin, Ackerman MJ. Human Anatomy (From the Renaissance to the Digital Age). New York: Harry N. Abrams; 2006. 344 pages.
  • Munzner T, Johnson C, Moorhead R, Pfister H, Rheingans P, Yoo TS. Visualization Viewpoints: NIH-NSF Visualization Research Challenges Report Summary. IEEE Computer Graphics and Applications. 2006 Mar-Apr;26(2):20-24.
  • Gordon S, Zimmerman G, Long LR, Antani S, Jeronimo J, Greenspan H. Content Analysis of Uterine Cervix Images: Initial Steps Towards Content Based Indexing and Retrieval of Cervigrams Proc of SPIE Vol. 6144 61444U-7
  • Jeronimo J, Long R, Neve L, Bopf M, Antani K, Schiffman M. Digital Tools for Collecting Data from Cervigrams for Research and Training in Colposcopy J Low Genit Tract Dis. 2006 Jan;10(1):16-25.
  • Antani S, Cheng J, Long J, Long LR, Thoma GR. Medical Validation and CBIR of Spine X-ray Images over the Internet Proc IS and T/SPIE Electronic Imaging Science and Technology 2006: Internet Imaging VII. San Jose. CA Jan 15-19, 2006, SPIE Vol. 6061 pp. 60610J (1-9).
  • Castle PE, Jeronimo J, Schiffman M, Herroro R, Rodriguez AC, Bratti MC, Hildesheim A, Wacholder S, Long LR, Neve L, Pfeiffer R, Burk RD. Age-related changes of the cervix influence human papillomavirus type distribution Cancer Res. 2006 Jan 15;66(2):1218-24.
  • Yoo TS. 3D Medical Informatics: Information Science in Multiple Dimensions. In: Chen H, Fuller SS, Friedman C, Hersh W, editors. Medical Informatics: Knowledge Management and Data Mining in Biomedicine. New York: Springer Science. p. 333-58.
  • Yoo TS. The Insight Toolkit: An Open-Source Initiative in Data Segmentation and Registration. In: Johnson C, Hansen C, editors. The Visualization Handbook. Amsterdam: Elsevier; 2005. p. 733-48.
  • Antani SK, Natarajan M, Long JL, Long RL, Thoma GR. Developing a Comprehensive System for Content-based Image Retrieval of Image and Text from a National Survey SPIE Medical Imaging, February 2005; San Diego, CA; vol. 5748:152-161.
  • Lee D, Antani SK, Xu X, Long LR. Design and Evaluation of a Curve Matching-based Spine X-ray Image Retrieval System SPIE Medical Imaging, February 2005; San Diego, CA; vol. 5748:365-373
  • Thoma GR. Public Access to Anatomic Images Chapter in: Medical Informatics: Knowledge Management and Data Mining in Biomedicine
  • Tulpule B, Hernes DL, Srinivasan Y, Mitra S, Sriraja Y, Nutter BS, Phillips B, Long RL, Ferris DG. A Probabilistic Approach to Segmentation and Classification of Neoplasia in Uterine Cervix Images Using Color and Geometric Features SPIE Medical Imaging, February 2005; San Diego, CA; vol. 5748:995-1003
  • Xu X, Lee DJ, Antani S, Long LR. Relevance Feedback for Spine X-ray Retrieval CBMS, 2005. Dublin, Ireland; pp. 197-202
  • Muin M, Fontelo P, Liu F, Ackerman MJ. SLIM: an alternative Web interface for MEDLINE/PubMed searches - a preliminary study. BMC Med Inform Decis Mak. 2005 Dec 1;5:37.
  • Fontelo P, Liu F, Ackerman MJ. MeSH Speller + askMEDLINE: Auto-completes MeSH Terms Then Searches MEDLINE/PubMed via Free-text, Natural Language Queries. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2005 Oct 22-26; Washington DC. p. 957.
  • Kim GR, Zambrowicz C, Zhang D, Fontelo P, Abbott PA. Promoting the Usability of Online AMIA Symposium Proceedings. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2005 Oct 22-26; Washington DC. p. 1008.
  • Liu F, Fontelo P, Muin M, Ackerman MJ. Virtual Evidence Cart - RP (VEC-RP). AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2005 Oct 22-26; Washington DC. p. 1034.
  • Muin M, Fontelo P, Ackerman MJ. PubMed informer: Monitoring MEDLINE/PubMed Through E-mail Alerts, SMS, PDA Downloads and RSS Feeds. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2005 Oct 22-26; Washington DC. p. 1057.
  • Yoo TS, Metaxas DN. Open science – combining open data and open source software: Medical image analysis with the Insight Toolkit. Med Image Anal. 2005 Dec;9(6):503-6. Epub 2005 Sep 19.
  • O'Brien JF, Yoo TS, editors. Modern Techniques for Implicit Modeling. Tutorial Notes for ACM SIGGRAPH 2005: the 32nd International Conference on Computer Graphics and Interactive Techniques; 2005 Jul 31-Aug 4; Los Angeles. 300 pages.
  • Morse BS, Liu W, Yoo TS, Subramanian KR. Active contours using a constraint-based implicit representation. Proceedings of IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR); 2005 Jun 20-25; San Diego. 285-92. DOI: 10.1109/CVPR.2005.59.
  • Ekong D, Fontelo P, Ackerman MJ. Computer Network for Health Care Organizations in Low-Resource Environments. Telemed J E Health. 2005 Apr;11(2):245.
  • Long RL, Antani SK, Thoma GR. Image Informatics At a National Research Center Comput Med Imaging Graph. 2005 Mar-Apr;29(2-3):171-93. Epub 2004 Dec 21
  • Fontelo P, Liu F, Ackerman MJ. askMEDLINE: A Free-Text, Natural Language Query Tool for MEDLINE/PubMed. BMC Med Inform Decis Mak [BMC Medical Informatics and Decision Making]. 2005 Mar 10;5:5.
  • Yoo TS, Ackerman MJ. Open Source Software for Medical Image Processing and Visualization. Communications of the ACM. 2005 Feb;48(2):55-9. DOI:10.1145/1042091.1042120.
  • Antani SK, Long RL, Thoma GR. Applying Vertebral Boundary Semantics to CBIR of Digitized Spine X-Ray Images Proc SPIE Electronic Imaging Science and Technology, Conference on Storage and Retrieval Methods and Applications for Multimedia. 2005;5682:98-107.
  • Fontelo P, Nahin A, Liu F, Kim G, Ackerman MJ. Accessing MEDLINE/PubMed with Handheld Devices: Developments and New Search Portals. Proceedings of 38th Hawaii International Conference on System Sciences; 2005 Jan 3-6; Big Island, Hawaii; Track 6:158b. DOI Bookmark: http://doi.ieeecomputersociety.org/10.1109/HICSS.2005.64.
  • Fontelo P, DiNino E, Johansen K, Khan A, Ackerman MJ. Virtual Microscopy: Potential Applications in Medical Education and Telemedicine in Countries with Developing Economies. Proceedings of the 38th Hawaii International Conference on System Sciences; 2005 Jan 3-6; Big Island, Hawaii: 7 pages. IEEE Computer Society.
  • Sneiderman CA, Ackerman MJ. Cellular Radio Telecommunication for Health Care: Benefits and Risks. J Am Med Inform Assoc. 2004 Nov-Dec;11(6):479-81. Epub 2004 Aug 6.
  • Ackerman MJ. Visible Human Project. McGraw-Hill 2004 Yearbook of Science & Technology. New York: McGraw-Hill. 2004. p. 369-72.
  • Kim J, Le DX, Thoma GR. Automated Labeling for Biomedical Journals Published in Foreign Languages Proc. 8th World Multiconference on Systemics, Cybernetics and Informatics. 2004 Jul.;:444-9.
  • Le DX, Thoma GR. Automated Article Links Identification for Web-Based Online Medical Journals Proc. 8th World Multiconference on Systemics, Cybernetics and Informatics. 2004 Jul.;5:462-6.
  • Mao S, Thoma G. Bayesian Learning of 2D Document Layout Models for Automated Preservation Metadata Extraction Proc. of the Fourth IASTED International Conference on Visualization, Imaging, and Image Processing (VIIP). 2004 Sept.;:329-34.
  • Qian X, Tagare HD, Fulbright R, Long R, Antani S. Shape Indexing in Medical Image Databases Using Pre-Shape Embedding Proc. Distributed Databases and Processing in Medical Image Computing, MICCAI. 2004 Sept.;: 36-44.
  • Shou J, Antani S, Long LR, Thoma GR. Evaluating Partial Shape Queries for Pathology-Based Retrieval of Verterbra Proc. 8th World Multiconference on Systemics, Cybernetics and Informatics. 2004 Jul.;12:155-60.
  • Xu X, Lee DJ, Antani S, Long LR. Curve Matching for Spine X-ray Image Retrieval Using Dynamic Programming Proc. 8th World Multiconference on Systemics, Cybernetics and Informatics. 2004 Jul.;12:172-6.
  • Ackerman MJ. Adopting New Technology Into Society: Going From an Idea to an Institution. Public Policy and Aging Report. 2004;14(1):25.
  • Antani S, Long R, Thoma GR. Content-Based Image Retrieval for Large Biomedical Image Archives Medinfo. 2004 Sept.;2004: 829-833.
  • Fontelo P, Ackerman MJ. Evidence-Based Medicine Needs Easy-To-Use Handheld Tools for Universal Utilization. MedGenMed. 2004 Sep 21;6(3):53.
  • Hauser SE, Demner-Fushman D, Ford G, Thoma GR. PubMed on Tap: Discovering Design Principles for Online Information Delivery to Handheld Computers Stud Health Technol Inform. 2004;107(Pt 2):1430-3.
  • Zhang Z. Methods to Visualize Interiors of Human Colons in Volumetric Datasets. In: Fieschi M, Coiera E, Li Y-CJ, editors. Stud Health Technol Inform [Studies in Health Technology and Informatics] – MEDINFO 2004: Proceedings of the 11th World Congress on Medical Informatics; 2004 Sep 7-11; San Francisco. p. 1931. IOS Press.
  • Yoo TS, editor. Insight Into Images: Principles and Practice for Segmentation, Registration, and Image Analysis. Natick, Massachusetts: A.K. Peters; 2004 Aug 16. 410 pages.
  • Jeronimo J, Schiffman M, Long LR, Neve L, Antani S. A Tool for Collection of Region Based Data from Uterine Cervix Images for Correlation of Visual and Clinical Variables Related to Cervical Neoplasia Proc. 17th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2004 June.;:558-62.
  • Stanley RJ, Seetharaman S, Long LR, Antani S, Thoma GR, Downey E. Image Analysis Techniques for the Automated Evaluation of Subaxial Subluxation in Cervical Spine X-Ray Images Proc. 17th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2004 June.;: 204-9.
  • Xu X, Lee DJ, Antani S, Long LR. Partial Shape Matching of Spine X-Ray Shapes Using Dynamic Programming Proc. 17th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2004 June.;: 97-102.
  • Zhan Zhang, Ackerman MJ, Jixing Li. A Prototype Colon Straightening System for Polyp Detection. Proceedings of 17th IEEE Symposium on Computer-Based Medical Systems (CBMS); 2004 Jun 24-25; Bethesda, Maryland:548-52. DOI: 10.1109/CBMS.2004.1311772.
  • Tagare HD, Qian X, Fulbright RK, Long RL, Antani SK. Shape Based Retrieval in NHANES II Proceedings of the 12th Annual ACM International Conference on Multimedia. 2004. 776-779.
  • Antani S, Xu X, Long R, Thoma G. Partial Shape Matching for CBIR of Spine X-Ray Images Proc. SPIE Electronic Imaging - Storage and Retrieval Methods and Applications for Multimedia. 2004 Jan; 5307: 1-8.
  • Chamarthy P, Stanley RJ, Cizek G, Long R, Antani S, Thoma G. Image Analysis Techniques for Characterizing Disc Space Narrowing in Cervical Vertebrae Computerized Medical Imaging and Graphics. 2004; 28: 39-50.
  • Cherukuri M, Stanley RJ, Long R, Antani S, Thoma G. Anterior Osteophyte Discrimination in Lumbar Vertebrae Using Size-Invariant Features Comput Med Imaging Graph. 2004 Jan-Mar;28(1-2):99-108.
  • Yang S, Guo J, King PS, Sriraja Y, Long LR. Multispectral Digital Cervigram Analyser in the Wavelet Domain for Early Detection of Cervical Cancer Proc. SPIE Medical Imaging. 2004 Feb; 5370.
  • Fletcher A, Yoo TS. Toward Public Volume Database Management: A Case Study of NOVA: The National Online Volumetric Archive. In: Ratib OM, Huang HK, editors. Proceedings of SPIE Medical Imaging 2004: PACS [Picture Archiving and Communication Systems] and Imaging Informatics; 2004 Feb 16-21; San Diego;5371:10 pages. SPIE; 2004 Apr 19. DOI: 10.1117/12.535376.
  • Fontelo P, Ackerman MJ, Kim G. Development of evidence-based medicine resources: Bridging clinical research to medical practice. In: Sprague RH, editor. Proceedings of the 37th Annual Hawaii International Conference on System Sciences (HICSS'04); 2004 Jan 5-8; Big Island, Hawaii; Track 6: 7 pages. IEEE Computer Society.
  • Ackerman MJ, Yoo T. The Visible Human Data Sets (VHD) and Insight Toolkit (ITk): experiments in open source software. AMIA Annu Symp Proc [American Medical Informatics Association Annual Symposium Proceedings]; 2003 Nov 8-12; Washington DC. p. 773.
  • Yoo TS. Toward Validation Databases for Medical Imaging: Engineering a Scientific Rendezvous. In: Proceedings of International Symposium on Information Retrieval and Exploration in Large Medical Image Collections (VISIM 2001); 2001 Oct 14-17; Utrecht, The Netherlands. p. 7-10.
  • Antani S, Long LR, Thoma GR. A Biomedical Information System for Combined Content-Based Retrieval of Spine X-ray Images and Associated Text Information 3rd Indian Conference on Computer Vision, Graphics, and Image Processing. 2002 Dec.
  • Antani S, Kasturi R, Jain R. A Survey on the Use of Pattern Recognition Methods for Abstraction Indexing and Retrieval of Images and Video Pattern Recognition Journal. 2002;35(4): 945-965.
  • Antani S, Long LR, Lee DJ, Thoma GR. Evaluation of Shape Indexing Methods for Content-Based Retrieval of X-Ray Images Proceedings of IS&T/SPIE Electronic Imaging Science and Technology, Storage and Retrieval for Media Databases. 2003 Jan; 5021: 405-16.
  • Antani S, Crandall D, Kasturi R. Robust Extraction of Text in Video International Conference of Pattern Recognition. 2000 Sept.;1:1445-9.
  • Antani S, Long LR, Thoma GR, Stanley RJ. Vertebra Shape Classification using MLP for Content-Based Image Retrieval International Neural Networks Society and IEEE Neural Networks Society. 2003 July 2003;:160-65.
  • Crandall D, Antani S, Kasturi R. Extraction of Special Effects Caption Text Events from Digital Video International Journal of Document Analysis and Recognition. 2003;5(2-3):138-57.
  • Ebert DS, Morris CJ, Rheingans P, Yoo TS. Designing Effective Transfer Functions for Volume Rendering from Photographic Volumes. IEEE Transactions on Visualization and Computer Graphics. 2002;8(2):183-97.
  • Gandhi T, Kasturi R, Antani S. Application of Planar Motion Segmentation for Scene Text Extraction Proc. of the 15th IEEE International Conference of Pattern Recognition. 2000 Sept.;1:1831-4.
  • Krainak DM, Long LR, Thoma GR. A Method of Content-Based Retrieval for a Spinal X-Ray Image Database Proc. of SPIE Medical Imaging: PACS and Integrated Medical Systems. 2002 Feb;4685.
  • Lee DJ, Antani S, Long LR. Similarity Measurement Using Polygon Curve Representation and Fourier Descriptors for Shape-Based Vertebral Image Retrieval Proc. of SPIE Medical Imaging: Image Processing. 2003;5032(3): 1283-91.
  • Long LR, Antani SK, Thoma GR. A Prototype Content-Based Image Retrieval System for Spine X-Rays Proc. 16th IEEE Symposium on Computer-Based Medical Systems. 2003 June;: 156-62.
  • Long LR, Antani S, Lee DJ, Krainak DM, Thoma GR. Biomedical Information from a National Collection of Spine X-Rays: Film to Content-Based Retrieval Proc. of SPIE Medical Imaging: PACS and Integrated Medical Information Systems. 2003 Feb;5033: 70-84.
  • Long LR, Thoma GR. Computer-Assisted Retrieval of Biomedical Image Features from Spine X-Rays: Progress and Prospects Proceeding of the 14th IEEE Symposium on Computer-Based Medical Systems (CBMS). 2001 Jul;:46-50.
  • Long LR, Thoma GR. Identification and Classification of Spine Vertebrae by Automated Methods Proc. SPIE Medical Imaging: Image Processing. 2001 Feb;:1478-89.
  • Long LR, Krainak DM, Thoma GR. Identifying Image Structures for Content-Based Retrieval of Digitized Spine X-Rays Proc. of SPIE Medical Imaging: Image Processing. 2002 Feb; 4684.
  • Long LR, Thoma GR. Indexing of Image Content in Spine X-Rays Proc. of SPIE Storage and Retrieval for Image and Video Databases VIII. 2000 Jan;3972:55-63.
  • Long LR, Thoma GR. Use of Shape Models to Search Digitized Spine X-Rays IEEE Computer-Based Medical Systems. 2000 June;: 255-60.
  • Long RL, Thoma GR. Segmentation and Image Navigation in Digitized Spine X-Rays Proc. SPIE Medical Imaging: Image Processing. 2000 Feb; 3979: 168-79.
  • Stanley RJ, Long LR. A Radius of Curvature Approach to Cervical Spine Vertebra Image Analysis Proc. 38th Annual Rocky Mountain Bioengineering Symposium, 37. 2001 Apr;: 385-90.
  • Tezmol A, Sari-Sarraf H, Mitra S, Long R, Gururajan A. Customized Hough Transform for Robust Segmentation of Cervical Vertebrae from X-Ray Images SSIAI. 2002;: 224-228.
  • Xu X, Lee DJ, Antani S, Long LR. Localizing Contour Points for Indexing an X-Ray Image Retrieval System Los Alamitos, CA: IEEE Computer Society. 2003 June;: 169-74.
  • Zamora G, Sari-Sarraf H, Mitra S, Long R. Analysis of the Feasibility of Using Active Shape Models for Segmentation of Gray Scale Images Proc. of SPIE Medical Imaging: Image Processing. 2002 Feb;4684:1370-81.
  • Zamora G, Sari-Sarraf H, Mitra S, Long LR. Estimation of Orientation and Position of Cervical Vertebrae for Segmentation with Active Shape Models Proc. SPIE Medical Imaging: Image Processing. 2001 Feb;4322:378-87.
  • Zamora G, Sari-Sarraf H, Long LR. Hierarchical Segmentation of Vertebrae from X-ray Images Proc. of SPIE Medical Imaging: Image Processing. 2003 Feb; 5032.
  • Fontelo P, Ackerman MJ, Kim G, Locatis C. The PDA as a Portal to Knowledge Sources in a Wireless Setting. Telemed J E Health. 2003 Jun;9(2):141-7. DOI: 10.1089/153056203766437480.
  • Locatis C, Fontelo P, Sneiderman C, Ackerman MJ, Uijtdehaage S, Candler C, Stensaas S, Dennis S. Webcasting videoconferences over IP: a synchronous communication experiment. J Am Med Inform Assoc. 2003 Mar-Apr;10(2):150-3. DOI: 10.1197/jamia.M1170.
  • Leiman D, Twose C, Lee TY, Fletcher A, Yoo T. Rendering an Archive in Three Dimensions. In: Galloway RL Jr, editor. Proceedings of SPIE Medical Imaging 2003: Visualization, Image-Guided Procedures, and Display; 2003 Feb 16-21; San Diego;5029:9 pages. SPIE; 2003 May 30. DOI: 10.1117/12.480210.
  • Ratiu P, Hillen B, Glaser J, Jenkins DB. Visible Human 2.0 - The Next Generation. In: Westwood JD, Hoffman HM, Mogel GT, Phillips R, Robb RA, Stredney D, editors. Stud Health Technol Inform [Studies in Health Technology and Informatics] -- Proceedings of the 11th annual Medicine Meets Virtual Reality conference; 2003 Jan;94:275-81. Amsterdam: IOS Press.
  • Ackerman MJ. The Visible Human Project Moves from Data to Knowledge. Lékař a technika. 2002;33(1):4-12.
  • Locatis C, Fontelo P, Ackerman MJ, Sneiderman C. Feasibility Studies in IP Videoconferencing, Streaming, and Wireless Communication. AMIA Annu Symp Proc [Proceedings of the American Medical Informatics Association Annual Symposium]; 2002 Nov 9-13; San Antonio, Texas. p. 1090.
  • Lowekamp B, Rheingans P, Yoo TS. Exploring Surface Characteristics with Interactive Gaussian Images (A Case Study). In: Moorhead R, Gross M, Joy KI, editors. Proceedings of IEEE Visualization 2002 (VIS 2002); 2002 Oct 27-Nov 1; Baltimore, Maryland. Piscataway, New Jersey: IEEE Press. p. 553-6. DOI: 10.1109/VISUAL.2002.1183828.
  • Ackerman MJ. Visible Human Project: From Data to Knowledge. In: Haux R, Kulikowski C, editors. Yearbook of Medical Informatics 2002: Medical Imaging Informatics. International Medical Informatics Association (IMIA). p. 115-7.
  • Long LR, Thoma GR. Landmarking and Feature Localization in Spine X-Rays Journal of Electronic Imaging. 2002 Oct; 10(4):939-56.
  • Ackerman MJ, Craft R, Ferrante F, Kratz M, Mandil S, Sapci H. Telemedicine/telehealth: an international perspective. Telemedicine technology. Telemed J E-Health. 2002 Spring;8(1):71-8.
  • Nishinaga N, Tatsumi H, Gill M, Akashib A, Nogawa H, Reategui I. Trans-Pacific Demonstration of Visible Human Space Communications. 2002 March; 17(4):303-311.
  • Yoo T, Ackerman MJ, Lorensen W, Schroeder W, Chalana V, Aylward S, Metaxas D, Whitaker R. Engineering and Algorithm Design for an Image Processing API: A Technical Report on ITK - The Insight Toolkit. In: Westwood JD, Hoffman HM, Robb RA, Stredney D, editors. Stud Health Technol Inform [Studies in Health Technology and Informatics] -- Proceedings of the 10th annual Medicine Meets Virtual Reality conference – Digital Upgrades: Applying Moore’s Law to Health; 2002 Jan 23-26; Newport Beach, California;85:586-92. Amsterdam: IOS Press.
  • Locatis C. Educational Technology and Instructional Development in Health Care. In: Reiser RA, Dempsey JV, editors. Trends and Issues in Instructional Design and Technology. Upper Saddle River, New Jersey: Merrill/Prentice Hall; 2002 Jan 1. p. 225-38.
  • Locatis CN. Instructional design and technology in healthcare. Chapter 17 in: Reiser RA, Dempsey JV, editors. Trends and Issues in Instructional Design and Technology. Upper Saddle River, New Jersey: Merrill Prentice Hall; 2002 Jan 1.
  • Fraser L, Locatis C. Effects of Link Annotations on Search Performance in Layered and Unlayered Hierarchically Organized Information Spaces. Journal of the American Society for Information Science and Technology. 2001;52(14):1255-61.
  • Locatis C. Design Considerations for Multimedia Programs. Chapter 18 in: Medsker K, Holdsworth KM, editors. Models and Strategies for Training Design. Silver Spring, Maryland: International Society for Performance Improvement; 2001. p. 355-73.
  • Morris J, Yoo TS, Chen D, Burgess J, Richardson AC. Computer Assisted Pedicle Screw Trajectory Guidance Using Fused Deposition Modeling. Abstract in Computer Assisted Surgery. 2001.
  • Yoo TS, Machiraju R, editors. From Transfer Functions to Level Sets: Advanced Topics in Volume Image Processing. Tutorial Notes for IEEE Visualization 2001; 2001 Oct 21-26; San Diego. 100 pages.
  • Yoo TS, Subramanian KR. Implicit Snakes: Active Constrained Implicit Models. In: Niessen WJ, Viergever MA, editors. Proceedings of the Fourth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI); 2001 Oct 14-17; Utrecht, The Netherlands. Lecture Notes in Computer Science 2208. Springer; 2001. p. 1379-81.
  • Yoo TS, Morris J, Chen DT, Burgess J, Richardson AC. Template Guided Intervention: Interactive Visualization and Design for Medical Fused Deposition Models. In: Niessen WJ, Viergever MA, editors. Proceedings of the Fourth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI); 2001 Oct 14-17; Utrecht, The Netherlands. Lecture Notes in Computer Science 2208. Springer; 2001. p. 45-8.
  • Ackerman MJ, Yoo T, Jenkins D. From Data to Knowledge - The Visible Human Project Continues. In: Patel VL, Rogers R, Haux R, editors. Stud Health Technol Inform [Studies in Health Technology and Informatics] – MEDINFO 2001: Proceedings of the 10th World Congress on Medical Informatics (2001 Sep 2-5; London);84(Part II):887-90. Amsterdam: IOS Press.
  • Marcelo AB, Fontelo P. Web-based Health Applications on Handheld Devices. Arch Pathol Lab Med. 2001 Aug;125(8):1015.
  • Yoo TS, Machiraju R, editors. Image Processing for Volume Graphics. Tutorial Notes for ACM SIGGRAPH 2001; 2001 Aug 12-17; Los Angeles. 333 pages.
  • Morse B, Yoo TS, Rheingans P, Chen DT, Subramanian KR. Interpolating Implicit Surfaces From Scattered Surface Data Using Compactly Supported Radial Basis Functions. In: Werner R, editor. Proceedings of the SMI 2001 International Conference on Shape Modeling and Applications; 2001 May 7-11; Genova, Italy. Los Alamitos, California: IEEE Computer Society Press; 2001. p. 89-98.
  • Yoo TS, Morse B, Subramanian KR, Rheingans P, Ackerman MJ. Anatomical Modeling from Unstructured Samples Using Variational Implicit Surfaces. In: Westwood JD, Hoffman HM, Mogel GT, Stredney D, Robb RA, editors. Stud Health Technol Inform [Studies in Health Technology and Informatics] -- Proceedings of Medicine Meets Virtual Reality 2001;81:594-600. Amsterdam: IOS Press.
  • Ackerman MJ, Banvard RA, guest editors. Computerized Medical Imaging and Graphics;24(3). Elsevier; 2000.
  • Kakadiaris IA, Chen D, Miller MJ, Loftin RB, Patrick C. Simulation-based determination of breast tissue engineering design patterns. Third Biennial Tissue Engineering Society International Meeting; 2000 Nov 30-Dec 3; Orlando, Florida.
  • Marcelo A, Fontelo P, Parolan M, Cualing H. Effect of Image Compression on Telepathology; A Randomized Clinical Trial. AMIA Annu Symp Proc; 2000 Nov 4-8; Los Angeles. p. 354-8.
  • Ackerman MJ. Computer Briefs: Is 21st Century E-Health Care Really Self Care? J Med Pract Manage. 2000 Sep-Oct;16(2):108-9.
  • Lin C, Loftin RB, Kakadiaris IA, Chen D, Su S. Interaction with Medical Volume Data on a Projection Workbench. 10th International Conference on Artificial Reality and Telexistence (ICAT 2000); 2000 Oct 25-27; National Taiwan University, Taipei, Taiwan.
  • Chen D, Kakadiaris IA, Miller MJ, Loftin RB, Patrick C. Modeling for Plastic and Reconstructive Breast Surgery. In: Delp SL, DiGioia AM, Jaramaz B, editors. Proceedings of the Third International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI); 2000 Oct 11-14; Pittsburgh. Lecture Notes in Computer Science 1935. Springer; 2000. p. 1040-50. DOI: 10.1007/978-3-540-40899-4_108.
  • Yoo TS, Ackerman MJ, Vannier M. Toward a Common Validation Methodology for Segmentation and Registration Algorithms. In: Delp SL, DiGioia AM, Jaramaz B, editors. Proceedings of the Third International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI); 2000 Oct 11-14; Pittsburgh. Lecture Notes in Computer Science 1935. Berlin: Springer-Verlag; 2000. p. 422-31.
  • Yoo TS, Machiraju R, editors. Image Processing for Volume Graphics and Analysis. Tutorial Notes for IEEE Visualization 2000; 2000 Oct 8-13; Salt Lake City. 125 pages.
  • Ackerman MJ, Banvard RA. Imaging Outcomes from the National Library of Medicine's Visible Human Project. Comput Med Imaging Graph. 2000 May-Jun;24(3):125-6.
  • Ackerman MJ, Yoo T, Jenkins D. The Visible Human Project: From Data to Knowledge. In: Lemke HU, Vannier MW, Inamura K, Farman AG, Doi K, editors. Proceedings of the 14th International Congress and Exhibition of Computer Assisted Radiology and Surgery (CARS2000); 2000 Jun 28-Jul 1; San Francisco. Amsterdam: Elsevier; 2000 Jun 1. p. 11-6.
  • Ebert D, McClanahan T, Rheingans P, Yoo TS. Direct Volume Rendering from Photographic Data. In: deLeeuw W, van Liere R, editors. DataVisualization 2000: Proceedings of the Joint EUROGRAPHICS and IEEE TCVG [Technical Committee on Visualization and Graphics] Symposium on Visualization; 2000 May 29-30; Amsterdam, The Netherlands. Berlin: Springer-Verlag; 2000 May 19. p. 137-46.
  • Yoo TS. Advances Toward Understanding of Multimodal Volume Data. Proceedings of High Care 2000: Innovations in Medicine; 2000 Feb 25-27; Ruhr University, Bochum, Germany.
  • Yoo TS, Ackerman MJ. A New Research Program in Medical Image Processing. In: Westwood JD, Hoffman HM, Mogel GT, Robb RA, Stredney D, editors. Stud Health Technol Inform [Studies in Health Technology and Informatics] -- Proceedings of Medicine Meets Virtual Reality 2000;70:385-91. Amsterdam: IOS Press.