Errors on Tags - Source Error

I. Introduction

This is the detail log for revising the baseline Brat tags. This page describes terms (tokens) are tagged in Brat, but the original source terms are correct spelling.

II. Revision Program

• Program: ${POST_PROCESS}/bin/PostBrat
• Input Data: ${POST_PROCESS_DATA}/Brat/Baseline/brat
• Output Data: ${POST_PROCESS_DATA}/Brat/BaselineRevised/bratRevised

• In Brat annotation - correct spelling for original terms
  • shell> PostBrat
1
21
  • manually go through each finding (errOnNonWordTags.data.src.tag)

    Tag	Instance No	Notes
    Updated in Brat
    TAG_ER_ER	1	The original tag is error. The original term is correct (not need to be corrected).
    TAG_ER_SV	6	The original tag is error. The original term is correct (spelling varaints).
    Add RealWord Tag in Brat
    TAG_OK_AA	24	The original tag is OK (the term is a correct spelling - abbreviations or acronyms)
    TAG_OK_RW	18	The original tag is OK (the term is a correct spelling - realWord)
    Do nothing
    TAG_OK_OK	3	The original tag is OK (correction is split)
    TAG_OK_ST	24	The original tag is OK (correction is split)
    TAG_OK_MG	2	The original tag is OK (correction is merge)
    TAG_TBD	0	To be done

  • Document in here (html)
  • Manually updates to revised Brat (BaselineRevised)

III. Revision Log

• Error (7) - (errOnNonWordTags.data.src.ER)

  File ID	ErrorType	Position	Original Term	Corrected Term	Notes
  10714	Punctuation	117|121	dr.s	drs	1, Delete-1
  11	Punctuation	69|76	indepth	in-depth	2, Delete-2
  12751	ToSplit	153|161	bonafide	bona fide	3, Delete-3
  13014	Misspelling	227|241	physio-therapy	physiotherapy	4, Delete-4
  13787	Misspelling	619|626	on-line	online	5, Delete-5
  14	Misspelling	440|448	develope	develop	6, Delete-6
  2	Misspelling	107|116	year-long	yearlong	7, Delete-7

• Real-Words (18) - (errOnNonWordTags.data.src.OK_RW):

  File ID	ErrorType	Position	Original Term	Corrected Term	Notes
  11186	Misspelling	294|299	repot	report	8, Change-1
  11456	Misspelling	248|249	m	am	9, Change-2
  12085	Misspelling	255|259	dies	does	10, Change-3
  12374	Misspelling	304|307	vs,	vs.	11, Change-4
  15410	Misspelling	0|9	williams'	williams	12, Change-5
  15410	Misspelling	65|74	william's	williams	13, Change-6
  16247	Misspelling	269|275	lanais	lantus	14, Change-7
  17281	Misspelling	94|99	doner	donor	15, Change-8
  17991	ToMerge	173|179	3/4 rd	3/4rd	16, Change-9
  19174	Misspelling	15|18	mam	madam	17, Change-10
  19268	Misspelling	72|81	vertebras	vertebrae	18, Change-11
  19883	Misspelling	572|575	amd	and	19, Change-12
  34	Misspelling	197|205	anderson	andersen	20, Change-13
  48	Misspelling	405|415	stereotypy	stereotypic	21, Change-14
  5	Misspelling	114|120	origen	origin	22, Change-15
  6	Misspelling	82|90	haberman	habermann	23, Cahnge-16
  7	Misspelling	7|13	robins	robin	24, Cahnge-17
  83	Misspelling	85|93	noonan's	noonan	25, Change-18

• Abbrviation/Acronyms (24) - (errOnNonWordTags.data.src.OK_AA):

  File ID	ErrorType	Position	Original Term	Corrected Term	Notes
  11804	Misspelling	27|29	ti	to	26, Change-19
  12374	Misspelling	791|794	ajd	and	27, Change-20
  12624	Misspelling	231|233	nt	not	28, Change-21
  12784	Misspelling	5|7	cn	can	29, Change-22
  12788	Misspelling	167|168	d	the	30, Change-23
  12800	Misspelling	1875|1877	BB	BP	31, Change-24
  13140	Misspelling	2|4	av	have	32, Change-25
  13140	Misspelling	27|29	av	have	33, Change-26
  13140	Misspelling	30|31	d	the	34, Change-27
  13165	ToSplit	59|62	iam	i am	35, Change-28
  13347	Misspelling	159|161	nd	and	36, Change-29
  13500	Misspelling	53|57	aisa	asia	37, Change-30
  13783	Misspelling	71|74	dnt	don't	38, Change-31
  14263	Misspelling	156|159	ito	to	39, Change-32
  14276	Misspelling	53|58	prego	pregnancy	40, Change-33
  16282	Misspelling	548|552	rply	reply	41, Change-34
  17170	Misspelling	19|22	gud	good	42, Change-35
  17672	Misspelling	265|267	mt	my	43, Change-36
  17756	Misspelling	2|5	hav	have	44, Change-37
  17942	Misspelling	717|720	abd	abdominal	45, Change-38
  17948	Punctuation	342|344	ie	(i.e.	46, Delete-8
  18668	Misspelling	20|23	hav	have	47, Change-39
  18669	ToSplit	11|14	iam	i am	48, Change-40
  94	Punctuation	397|399	eg	e.g.	49, Delete-9