 |
| Year 2008 | Back to top |
| An Effective Computerized Reminder for Contact Isolation of Patients Colonized or Infected with Resistant Organisms |
Kho AN, Dexter PR, Warvel JS, Belsito AW, Commiskey M, Wilson SJ, Hui SL, McDonald CJ
|
| ijmedinf 77 (2008) 194-198 |
| (Abstract) (PDF)
|
|
| A Spine X-Ray Image Retrieval System Using Partial Shape Matching |
Xu X, Lee DJ, Antani S, Long LR
|
| IEEE Transactions on Information Technology in Biomedicine. January 2008;12(1):100-8 |
| (Abstract) (PDF)
|
|
| Exploring use of Images in Clinical Articles for Decision Support in Evidence-Based Medicine |
Antani SK, Demner-Fushman D, Li J, Srinivasan BV, Thoma GR
|
| Proc. SPIE-IS/T Electronic Imaging. San Jose, CA. January 2008;6815:68150Q(1-10) |
| (Abstract) (PDF)
|
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| Extracting a Sparsely-Located Named Entity from Online HTML Medical Articles Using Support Vector Machine |
|
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| Proc. SPIE-IS/T Electronic Imaging. San Jose, CA. January 2008;6815:6815OP(1-10) |
| (Abstract) (PDF)
|
|
| Hybrid Approach Combining Contextual and Statistical Information for Identifying MEDLINE Citation Terms |
|
|
| Proc. SPIE-IS/T Electronic Imaging. San Jose, CA. January 2008;6815:68150P(1-9) |
| (Abstract) (PDF)
|
|
| Ontology of Gaps in Content-Based Image Retrieval |
Deserno TM, Antani SK, Long LR
|
| Journal of Digital Imaging. February 2008 |
| (Abstract) (PDF)
|
|
| Size-invariant Descriptors for Detecting Regions of Abnormal Growth in Cervical Vertebrae |
Stanley RJ, Antani S, Long LR, Thoma GR, Gupta K, Das M
|
| Computerized Medical Imaging and Graphics 32 (2008) 44-52 |
| (Abstract) (PDF)
|
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| Year 2007 | Back to top |
| Advancing Translational Research with the Semantic Web |
Ruttenberg A, Clark T, Bug W, Samwald M, Bodenreider O, Chen H, et al
|
| BMC Bioinformatics 2007;8(Suppl 3):S2. |
| (Abstract) (PDF)
|
|
| A Lightweight Statistics Package for Interactive Publications |
Simpson M, Ford G, Antani S, Demner-Fushman D, Thoma GR
|
| Poster at 20th NIH Research Festival (TECH-15), September 2007, National Institutes of Health |
| (Abstract) (PDF)
|
|
| Aligning Anatomical Ontologies: The Role of Complex Structural Rules |
Zhang S, Bodenreider O, Kantz N
|
| IIAS-Transactions on Systems Research and Cybernetics - Proceedings of the 18th International Conference on Systems Research, Informatics and Cybernetics (InterSymp 2006) 2006;VI(2):27-32. |
| (Abstract) (PDF)
|
|
| A Multidiscipline Conceptual Framework for Consumer Health Informatics |
|
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| Medinfo 2007 12 (Pt2):1169-1173. |
| (Abstract) (PDF)
|
|
| An Evaluation of the Usability of Accessing MEDLINE over Short Messaging System |
|
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| MEDINFO 2007:235-236 |
| (Abstract) (PDF)
|
|
| An Experiment in Integrationg Large Biomedical Knowledge Resources with RDF: Application to Associating Genotype and Phenotype Information |
Sahoo S, Bodenreider O, Zeng K, Sheth AP
|
| Proceedings of the workshop on Health Care and Life Sciences Data Integration for the Semantic Web at the 16th International World Wide Web Conference (WWW2007) (electronic proceedings: http://www2007.org/workshops/paper_149.pdf) |
| (Abstract) (PDF)
|
|
| Answering Clinical Questions with Knowledge-based and Statistical Techniques |
|
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| Computational Linguistics. 2007 Jan;33(1):63-103 |
| (Abstract) (PDF)
|
|
| Archiving a Historic Medico-legal Collection: Automation and Workflow Customization |
Misra D, Mao S, Rees J, Thoma GR
|
| Proc. IS&T Archiving 2007. Arlington, Virginia, May 2007; 157-61. |
| (Abstract) (PDF)
|
|
| A Spine X-ray Image Retrieval System using Partial Shape Matching |
Xu X, Lee DJ, Antani S, Long LR
|
| To appear in IEEE Transactions on Information Technology in Biomedicine. 2007 |
| (Abstract) (PDF)
|
|
| Assessing Consumer Health Vocabulary Familiarity: An Exploratory Study |
Keselman A, Tse T, Crowell J et al
|
| J Med Internet Res. 2007 Mar 14;9(1):e5 |
| (Abstract) (PDF)
|
|
| A UMLS-based Spell Checker for Natural Language Processing in Vaccine Safety |
Tolentino HD, Matters MD, Walop W, Law B, Tong W, Liu F, Fontelo P, Kohl K, Payne DC
|
| BMC Medical Informatics and Decision Making 2007, 7:3 |
| (Abstract) (PDF)
|
|
| Automatically Finding Images for Clinical Decision Support |
Demner-Fushman D, Antani S, Thoma GR
|
| To appear in Proceedings of IEEE International Workshop on Data Mining in Medicine (DM-Med 2007). Omaha, NE, October 2007, pp. 139-144. |
| (Abstract) (PDF)
|
|
| Automatic Evaluation of Uterine Cervix Segmentations |
Lotenberg S, Gordon S, Long LR, Antani SK, Jeronimo J, Greenspan H
|
| Proc. SPIE Medical Imaging 2007. Vol. 6515: 65151J-1-12. |
| (Abstract) (PDF)
|
|
| Automatic Indexing of Specialized Documents: Using Generic vs. Domain-Specific Document Representations |
Neveol A, Mork JG, Aronson R
|
| Proc BioNLP 2007 Workshop, 183-92. |
| (Abstract) (PDF)
|
|
| BabelMeSH2 and PICO Linguist2: Combined Language Search for MEDLINE/PubMed |
Liu F, Fontelo P, Ackerman M
|
| AMIA Annu Symp Proc; 2007;1036 |
| (Abstract) (PDF)
|
|
| Challenges in Automated Detection of Cervical Intraepithelial Neoplasia |
Srinivasan Y, Nutter BS, Mitra SD, Yang S, Phillips B, Long LR
|
| Proc. SPIE Medical Imaging 2007. Vol. 6514: 65140F-1-11. |
| (Abstract) (PDF)
|
|
| Clinical, Classroom or Personal Education: Attitudes About Health Literacy |
|
|
| JMLA 95:2 (April 2007): 127-137. |
| (Abstract) (PDF)
|
|
| Clinical Ontologies for Discovery Applications |
Lussier YA, Bodenreider O
|
| In: Baker CJO, Cheung K-H, editors. Semantic Web: Revolutionizing knowledge discovery in the life sciences. New York: Springer; 2007. p. 101-119. |
| (Abstract) (PDF)
|
|
| Co-evolutionary Rates of Functionally Related Yeast Genes |
Marino-Ramirez L, Bodenreider O, Kantz N, Jordan IK
|
| Evolutionary Bioinformatics Online 2006;2:295-300. |
| (Abstract) (PDF)
|
|
| Combining Lexical and Semantic Methods of Inter-terminology Mapping Using the UMLS |
Fung KW, Bodenreider O, Aronson AR, Hole WT, Srinivasan S
|
| Medinfo 2007:605-609. |
| (Abstract) (PDF)
|
|
| Combining Resources to Find Answers to Biomedical Questions |
Demner-Fushman D, Humphrey SM, Ide NC, Loane RF, et al
|
| Proc TREC 2007, 205-14 |
| (Abstract) (PDF)
|
|
| Combining Static Classifiers and Class Syntax Models for Logical Entity Recognition in Scanned Historical Documents |
Mao S, Mansukhani P, Thoma GR
|
| Proc. IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR), Minneapolis, Minnesota, June 2007, pp. 1-8. |
| (Abstract) (PDF)
|
|
| Comparative Performance Analysis of Cervix ROI Extraction and Specular Reflection Removal Algorithms for Uterine Cervix Image Analysis |
Xue Z, Antani SK, Long LR, Thoma GR
|
| Proc. SPIE Medical Imaging 2007. Vol. 6512: 65124I-1-9. |
| (Abstract) (PDF)
|
|
| Comparing Two Approaches for Aligning Representations of Anatomy |
Zheng S, Mork P, Bodenreider O, Bernstein PA
|
| Artificial Intelligence in Medicine 2007;39(3):227-236. |
| (Abstract) (PDF)
|
|
| Construction of Korean Version PICO Linguist and BabelMeSH |
Jung B, Lee S, Fontelo P, Liu F, Kim S
|
| Korean Society of Medical Informatics (KOSMI) Fall Congress Proceedings 2007 |
| (Abstract) (PDF)
|
|
| Cryoelectron Tomographic Analysis of an HIV-neutralizing Protein and Its Complex with Native Viral gp120 |
Bennett A, Liu J, Van Ryk D, Bliss D, Arthos J, Henderson RM, Subramaniam S
|
| J Biol Chem. 2007 Sep 21;282(38):27754-9. Epub 2007 Jun 28. |
| (Abstract) (PDF)
|
|
| Do Computer-generated Summaries, 'The Bottom Line (TBL)' Accurately Reflect Published Journal Abstracts? |
|
|
| AMIA Annu Symp Proc; 2007;1135 |
| (Abstract) (PDF)
|
|
| Essie: A Concept-based Search Engine for Structured BiomedicalText |
Ide NC, Loane RF, Demner-Fushman D
|
| J Am Med Inform Assoc 2007;14(3):253-263. |
| (Abstract) (PDF)
|
|
| Evidence-based Medicine Among Internal Medicine Residents in a Community Hospital Program Using Smart Phones |
Leon SA, Fontelo P, Green L, Ackerman M, Liu F
|
| BMC Medical Informatics and Decision Making 2007, 7:5 |
| (Abstract) (PDF)
|
|
| Experience in Aligning Anatomical Ontologies |
|
|
| International Journal on Semantic Web and Information Systems 2007;3(2):1-26. |
| (Abstract) (PDF)
|
|
| Experience in Integrating Large RDF-based Biomedical Knowledge Resources with Oracle |
|
|
| Proceedings of the 8th International Oracle Life Sciences User Group Meeting 2007:(electronic proceedings: http://www.olsug.org/wiki/images/d/d1/Kelly_Zheng.pdf) |
| (Abstract) (PDF)
|
|
| Exploring Access to Scientific Literature Using Content-Based Image Retrieval |
Deserno TM, Antani SK, Long LR
|
| Proc. SPIE Medical Imaging 2007. Vol. 6516: 65160L-1-8. |
| (Abstract) (PDF)
|
|
| Extracting Semantic Predications from MEDLINE Citations for Pharmacogenomics |
Ahlers C, Fiszman M, Demner-Fushman D, Lang F, Rindflesch TC
|
| Pacific Symposium on Biocomputing 2007 12:209-220 |
| (Abstract) (PDF)
|
|
| Extractive Summarization in Clinical Trials Protocol Summaries: A Case Study |
Rosemblat G, Graham L, Tse T
|
| In: Proceedings, 3rd Indian International Conference on Artificial Intelligence (IICAI-2007), pp. 1824-1837 |
| (Abstract) (PDF)
|
|
| Fine-Grained Indexing of the Biomedical Literature: MeSH Subheading Attachment for a MEDLINE Indexing Tool |
Neveol A, Shooshan SE, Mork JG, Aronson AR
|
| AMIA Annu Symp Proc. 2007;:553-7 |
| (Abstract) (PDF)
|
|
| From 'Glycosyltransferase' to 'Congenital Muscular Dystrophy': Integrating Knowledge from NCBI Entrez Gene and the Gene Ontology |
Sahoo SS, Zeng K, Bodenreider O, Sheth A
|
| MEDINFO 2007:1260-1264 |
| (Abstract) (PDF)
|
|
| From Indexing the Biomedical Literature to Coding Clinical Text: Experience with MTI and Machine Learning Approaches |
Aronson AR, Bodenreider O, Demner-Fushman D, Fung KW, Lee VK, Mork JG, Neveol A, Peters L, Rogers WJ
|
| Proc. 2007 Workshop on Biomedical Natural Language Processing (BioNL'07), June 2007, pp. 105-112, Prague, Czech Republic. |
| (Abstract) (PDF)
|
|
| Gaps in Content-Based Image Retrieval |
Deserno TM, Antani SK, Long LR
|
| Proc. SPIE Medical Imaging 2007. Vol. 6516: 65160J-1-11. |
| (Abstract) (PDF)
|
|
| Geographically Distributed Complementary Content-Based Image Retrieval Systems for Biomedical Image Informatics |
Antani SK, Deserno TM, Leon S, Long LR, Thoma GR
|
| MEDINFO August 2007, pp. 493:7 |
| (Abstract) (PDF)
|
|
| Hybrid Alignment Strategy for Anatomical Ontologies Results of the 2007 Ontology Alignment Contest |
|
|
| Proc. OAEI 2007:139-149. |
| (Abstract) (PDF)
|
|
| Identification and Segmentation of Multi-Panel Images in Biomedical Journal Articles |
Srinivasan B, Antani S, Demner-Fushman D, Thoma GR
|
| Poster at 20th NIH Research Festival (BIOINFO-1), September 2007, National Institutes of Health |
| (Abstract) (PDF)
|
|
| Identification of 'comment-on sentences' in Online Biomedical Documents Using Support Vector Machines |
|
|
| Proc. SPIE conference on Document Recognition and Retrieval, vol. 6500, pp.65000O-1-65000O-8, San Jose, CA, January 2007 |
| (Abstract) (PDF)
|
|
| Identifying Mismatches in Alignments of Large Anatomical Ontologies |
|
|
| Proc AMIA Annu Symp; 2007:851-855 |
| (Abstract) (PDF)
|
|
| Integrating the UMLS into an RDF-Based Biomedical Knowledge Repository |
|
|
| Proc AMIA Annu Symp; 2007:1170 |
| (Abstract) (PDF)
|
|
| Interfacing Global and Local CBIR Systems for Medical Image Retrieval |
Antani SK, Deserno TM, Long LR, Guld MO, Neve L, Thoma GR
|
| Proc. Workshop on Medical Imaging Research (Bildverarbeitung fur die Medizin). March 2007; 166-71. |
| (Abstract) (PDF)
|
|
| Inter-observer Agreement in the Evaluation of Digitized Cervical Images |
Jeronimo J, Massad S, Castle PE, Schiffman M, NIH/ASCCP Research Group
|
| American Journal of Obstetrics and Gynecology. Vol. 197, Issue 1, July 2007 |
| (Abstract) |
|
| Interpreting Comparative Constructons in Biomedical Text |
Fiszman M, Demner-Fushman D, Lang FM, Goetz P, Rindflesch TC
|
| Proc. 2007 Workshop on Biomedical Natural Language Processing (BioNL'07), June 2007, pp. 137-144, Prague, Czech Republic. |
| (Abstract) (PDF)
|
|
| Investigating CBIR Techniques for Cervicographic Images |
Xue Z, Antani S, Long LR, Jeronimo J, Thoma GR
|
| To appear in Proceedings of the 2007 Annual Symposium of the American Medical Information Association (AMIA 2007), Chicago, November 2007, pp. 826-830 |
| (Abstract) (PDF)
|
|
| Investigating Subsumption in SNOMED CT: An Exploration into Large Description Logic-based Biomedical Terminologies |
Bodenreider O, Smith B, Kumar A, Burgun A
|
| Artificial Intelligence in Medicine 2007;39(3):183-195. |
| (Abstract) (PDF)
|
|
| Issues in Integrating Epidemiology and Research Information in Oncology: Experience with ICD-O3 and the NCI Thesaurus |
|
|
| Proc AMIA Annu Symp; 2007:pp 85-89. |
| (Abstract) (PDF)
|
|
| Issues in the Registration of Clinical Trials |
Zarin DA, Ide NC, Tse T, Harlan WR, West JC, Lindberg DAB
|
| JAMA 2007:297(19):2112-2120. |
| (Abstract) (PDF)
|
|
| Keeping the Promises Associated with Your Digital Assets: Is it Possible? |
|
|
| In: Archiving 2007 Final Program and Proceedings, pp.146-149, 2007. |
| (Abstract) (PDF)
|
|
| Knowledge-Based Methods to Help Clinicians Find Answers in MEDLINE |
Sneiderman CA, Demner-Fushman D, Fiszman M, Ide NC, Rindflesch TC
|
| 2007 Nov-Dec;14(6):772-80. Epub 2007 Aug 21 |
| (Abstract) (PDF)
|
|
| Lessons Learned from Cross-Validating Alignments Between Large Anatomical Ontologies |
|
|
| MEDINFO 2007:822-826. |
| (Abstract) (PDF)
|
|
| Localizing Text and Symbols in Images from Biomedical Journal Articles |
Li J, Demner-Fushman D, Thoma GR
|
| Poster at 20th NIH Research Festival (BIOINFO-6), September 2007, National Institutes of Health |
| (Abstract) (PDF)
|
|
| MedlinePlus en Espaniol and Spanish-Speakers |
|
|
| AMIA Annu Symp Proc; 2007;1028 |
| (Abstract) (PDF)
|
|
| MMSPix - A Multimedia Messaging Service (MMS) Medical Images Weblog |
Fontelo P, Liu F, Muin M, Ducut E, Ackerman A, Paalan-Vasquez F
|
| AMIA Annu Symp Proc; 2007;956 |
| (Abstract) (PDF)
|
|
| Multiple Approaches to Fine-Grained Indexing of the Biomedical Literature |
Neveol A, Shooshan SE, Humphrey SM, Rindflesch TC, Aronson AR
|
| Pacific Symposium on Biocomputing 2007 12:293-303 |
| (Abstract) (PDF)
|
|
| New Frontiers in Biomedical Text Mining |
Zweigenbaum P, Demner-Fushman D, Yu H, Cohen KB
|
| Pacific Symposium on Biocomputing 12:205-208(2007) |
| (Abstract) (PDF)
|
|
| Next Generation Networking: Distributed Multimedia Information for Healthcare |
|
|
| Multimed. Tools Appl. 2007, 33:5-11. |
| (Abstract) (PDF)
|
|
| Oncologic Pathology in Biomedical Terminologies: Challenges for Data Integration |
|
|
| Proc. of the APIII conference on "Anatomic Pathology Informatics and Imaging Support for Translational Medicine", Pittsburgh, Pennsylvania, September 9-12, 2007 2007:Abstract 342. |
| (Abstract) (PDF)
|
|
| Online Medical Journal Article Layout Analysis |
|
|
| Proc. SPIE-IS&T Electronic Imaging 2007, SPIE Vol. 6500: 65000V (1-12). |
| (Abstract) (PDF)
|
|
| PDF File Migration to PDF/A: Technical Considerations |
Walker FL, Gallagher ME, Thoma GR
|
| Proc. IS&T Archiving 2007. Arlington, Virginia, May 2007; 6-11. |
| (Abstract) (PDF)
|
|
| Performance, Instruction, and Technology in Health Care Education |
|
|
| In R. Reiser and J. Dempsey (Eds.) Trends and Issues in Instructional Design and Technology, (2nd Ed.) Merrill Prentice Hall: Upper Saddle River, NJ, 2007. |
| (Abstract) (PDF)
|
|
| PICO Linguist and BabelMeSH: Development and Partial Evaluation of Evidence-based Multilanguage Search Tools for MEDLINE/PubMed |
Fontelo P, Liu F, Leon S, Anne A, Ackerman M
|
| MEDINFO 2007, K. Kuhn et al. (Eds.) |
| (Abstract) (PDF)
|
|
| Potential Applications of RFID Technology in Medicine |
Fontelo P, Liu F, Ackerman M
|
| Telemedicine and e-Health. Apr 2007, Vol. 13, No. 2: 176-177 |
| (Abstract) (PDF)
|
|
| Registering a Clinical Trial in ClinicalTrials.gov |
|
|
| Chest 2007;131;909-912; Prepublished online February 15, 2007; DOI10.1378/chest.06-2450 |
| (Abstract) (PDF)
|
|
| RxNav: An Integrated View on Drug Information |
Zeng K, Bodenreider O, Kilbourne J, Nelson SJ
|
| Proc AMIA Annu Symp; 2007:1202 |
| (Abstract) (PDF)
|
|
| RxNav: Towards an Integrated View on Drug Information |
Zeng K, Bodenreider O, Kilbourne J, Nelson S
|
| MEDINFO 2007:386. |
| (Abstract) (PDF)
|
|
| Salvation by Registration |
|
|
| N Engl J Med 356;2 |
| (Abstract) (PDF)
|
|
| Scanning the Emerging Infectious Diseases Horizon - Visualizing ProMED Emails Using EpiSPIDER |
Tolentino H, Kamadjeu R, Fontelo P, Liu F et al.
|
| Advances in Disease Surveillance 2007;2:169 |
| (Abstract) (PDF)
|
|
| Semantic Clustering of Answers to Clinical Questions |
|
|
| To appear in Proceedings of the 2007 Annual Symposium of the American Medical Information Association (AMIA 2007), Chicago, November 2007, pp. 458-462 |
| (Abstract) (PDF)
|
|
| Simultaneous Layout Style and Logical Entity Recognition in a Heterogeneous Collection of Documents |
|
|
| Proceedings of 9th Int. Conf. on Document Analysis and Recognition (ICDAR2007). Curitiba, Brazil; September 2007, pp. 118-22 |
| (Abstract) (PDF)
|
|
| Slide2Go: A Virtual Slide Collection for Pathology Education |
Conran R, Fontelo P, Liu F, Fontelo M, White E
|
| AMIA Annu Symp Proc; 2007;918 |
| (Abstract) (PDF)
|
|
| SPIRS: A Framework for Content-based Image Retrieval from Large Biomedical Databases |
Hsu W, Long LR, Antani SK
|
| Proc. of MEDINFO August 2007. K. Kuhn etal. (Eds.). 188:92(2007) |
| (Abstract) (PDF)
|
|
| Structure and Content Analysis for HTML Medical Articles: A Hidden Markov Model Approach |
|
|
| Proc August 2007 ACM Symposium on Document Engineering. pp. 199-201. |
| (Abstract) (PDF)
|
|
| Technical Development of PubMed Interact: an Improved Interface for MEDLINE/PubMed Searches |
|
|
| BMC Medical Informatics and Decision Making 2006, 6:36. |
| (Abstract) (PDF)
|
|
| Term Identification Methods for Consumer Health Vocabulary Development |
Zeng QT, Tse T, Divita G et al
|
| J Med Internet Res. 2007 Feb 28;9(1):e4 |
| (Abstract) (PDF)
|
|
| The Consumers' Perspective: Text Features and Readability of Consumer Health Text |
|
|
| Mednet 2007: Germany. 12 Oct 2007. |
| (Abstract) |
|
| Using Discourse Analysis to Improve Text Categorization in MEDLINE |
Ruch P, Geissbuhler A, Gobeill J, Lisacek F, Tbahriti I, Veuthey A, Aronson AR
|
| Medinfo 2007:710-715. |
| (Abstract) (PDF)
|
|
| Using Wireless Handheld Computers to Seek Information at the Point of Care: An Evaluation by Clinicians |
Hauser SE, Demner-Fushman D, Jacobs JL, Humphrey SM, Ford G, Thoma GR
|
| J Am Med Inform Assoc 2007;14:807-814. DOI 10.1197/jamia.M2424. |
| (Abstract) (PDF)
|
|
| Utilization of the PICO Framework to Improve Searching PubMed for Clinical Questions |
Schardt C, Adams MB, Owens T, Jeitz S, Fontelo P
|
| BMC Med Inform Decis Mak. 2007 Jun 15;7:16. |
| (Abstract) (PDF)
|
|
| Visual Appearance of the Uterine Cervix: Correlation with Human Papillomavirus Detection and Type |
Jeronimo J, Massad LS, Schiffman M for the NIH-ASCCP Research Group
|
| Am J Obstet Gynecol 2007; 197:47.e1-47.e8. |
| (Abstract) (PDF)
|
|
| Web-based STAPLE for Quality Estimation of Multiple image Segmentations |
Zhu Y, Long LR, Antani S, Xue Z, Thoma GR
|
| Poster at 20th NIH Research Festival (IMAG-12), September 2007, National Institutes of Health |
| (Abstract) (PDF)
|
|
| Why Media Matter: Media Effectiveness from a Performance Perspective |
|
|
| Performance Improvement Quarterly, 20(1), 9-22. |
| (Abstract) (PDF)
|
|
| |
|
| Year 2006 | Back to top |
| A Blended Training Approach Using Videoconferencing for Distance Education |
Locatis C, Gaines C, Liu W, Gill MJ, Carney J, Foster J, McCall V, Woods M
|
| Journal of the Medical Library Association, October 2006, 94(4):464-8 |
| (Abstract) (PDF)
|
|
| Anatomy in the Digital Age |
|
|
| In: Rifkin, B.A., M.J. Ackerman, J. Folkenberg. Human Anatomy (From the Renaissance to the Digital Age), Abrams, New York, NY, 318-329, 2006. |
| (Abstract) (PDF)
|
|
| Answer Extraction, Semantic Clustering, and Extractive Summarization for Clinical Question Answering |
|
|
| Proceedings of the 21th International Conference on Computational Linguistics and 44th Annual Meeting of the Association for Computational Linguistics (COLING/ACL 2006), July 2006, Sydney, Australia |
| (Abstract) (PDF)
|
|
| A Pragmatic Approach to Summary Extraction in Clinical Trials |
|
|
| In Proceedings of the BioNLP Workshop on Linking Natural Language Processing and Biology at HLT-NAACL 06, pages 124-125, New York City, June 2006. |
| (Abstract) (PDF)
|
|
| Argumentative Feedback: A Linguistically-motivated Term Expansion for Information Retrieval |
Ruch P, Tbahriti I, Bobeill J, Aronson AR
|
| Proc. COLING/ACL 2006, 675-82 |
| (Abstract) (PDF)
|
|
| Argument-predicate Distance as a Filter for Enhancing Precision in Extracting Predications on the Genetic Etiology of Disease |
Masseroli M, Kilicoglu H, Lang F-M, Loane RF, Rindflesch TC
|
| BMC Bioinformatics 2006; 7:291 |
| (Abstract) (PDF)
|
|
| askMEDLINE: a Report on a Year-long Experience |
Fontelo P, Liu F, Ackerman MJ, Schardt CM, Keitz SA
|
| AMIA Annu Symp Proc. 2006;923. |
| (Abstract) (PDF)
|
|
| Assessing Consumer Health Vocabulary Familiarity: An Exploratory Study |
Keselman A, Tse T, Crowell J, Browne A, Ngo L, Zeng Q
|
| Mednet 2006 |
| (Abstract) (PDF)
|
|
| Automatically Identifying Health Outcome Information in MEDLINE Records |
Demner-Fushman D, Few B, Hauser SE, Thoma GR
|
| J Am Med Inform Assoc. 2006 Jan-Feb;13(1):52-60 |
| (Abstract) (PDF)
|
|
| Automatic Extraction of Bibliographic Information from Biomedical Online Journal Articles Using a String Matching Algorithm |
|
|
| Proc. 19th IEEE International Symposium on Computer-Based Medical Systems, June 2006, Salt Lake City, Utah; 905-10 |
| (Abstract) (PDF)
|
|
| Automatic Medical Image Annotation and Retrieval Using SECC |
Yao J, Antani S, Long LR, Thoma GR, Zhang Z
|
| Proc. 19th International Symposium on Computer-Based Medical Systems (CBMS 2006), June 2006, Salt Lake City, Utah; 105-10 |
| (Abstract) (PDF)
|
|
| BabelMeSH: Development of a Cross-Language Tool for MEDLINE/PubMed |
Liu F, Fontelo P, Ackerman MJ
|
| Proc. AMIA 2006, American Medical Informatics Association, Bethesda, MD, pg. 1012, 2006 |
| (Abstract) (PDF)
|
|
| Besides Precision and Recall: Exploring Alternative Approaches to Evaluating an Automatic Indexing Tool for MEDLINE |
Neveol A, Zeng K, Bodenreider O
|
| Proc AMIA Symp 2006:589-593 |
| (Abstract) (PDF)
|
|
| Bio-ontologies: Current Trends and Future Directions |
|
|
| Briefings in Bioinformatics 2006;7(3):256-274 |
| (Abstract) (PDF)
|
|
| Challenges and Strategies of the Genetics Home Reference |
Mitchell JA, Fomous C, Fun J
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| Journal of Web Semantics: Science, Services and Agents on the World Wide Web 2006;4(3):181-195. |
| (Abstract) (PDF)
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| Combining DOM Tree and Geometric Layout Analysis for Online Medical Journal Article Segmentation |
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| Proc. Joint Conference on Digital Libraries (JCDL), June 2006, Chapel Hill, NC; 119-28 |
| (Abstract) (PDF)
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| Comparing the Representation of Anatomy in the FMA and SNOMED CT |
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| Proc AMIA Symp 2006:46-50 |
| (Abstract) (PDF)
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| Comparing Two Approaches to Eliminating Cycles in Terminological Systems |
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| Proceedings of the 15th conference on Pattern Recognition and Artificial Intelligence (RFIA 2006)(electronic proceedings) |
| (Abstract) (PDF)
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| Computer Briefs: Mac versus PC |
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| J. Med. Pract. Manag., 21(6):329-330, 2006 |
| (Abstract) (PDF)
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| Computer Briefs: The Open Triangle |
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| J. Med. Pract. Manag., 22(2):105-106, 2006 |
| (Abstract) (PDF)
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| Concept Negation in Free Text Components of Vaccine Safety Reports |
Tolentino H, Matters M, Walop W, Law B, Tong W, Liu F, Fontelo P, Kohl K, Payne D
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| AMIA Annu Symp Proc. 2006;1122 |
| (Abstract) (PDF)
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| Content Analysis of Uterine Cervix Images: Initial Steps Towards Content Based Indexing and Retrieval of Cervigrams |
Gordon S, Zimmerman G, Long LR, Antani S, Jeronimo J, Greenspan H
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| Proc. of SPIE Vol. 6144 61444U-7 |
| (Abstract) (PDF)
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| Cross-Language Search in a Monolingual Health Information System: Flexible Designs and Lexical Processes |
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| In Proceedings of the 9th ISKO Conference, pages 173-182, Vienna, Austria, July 2006. |
| (Abstract) (PDF)
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| Data Integration Through Data Elements: Mapping Data Elements to Terminological Resources |
Mougin F, Burgun A, Bodenreider O
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| Proceedings of the Second Interntional Symposium on Semantic Mining in Biomedicine (SMBM-2006) 2006:52-59 |
| (Abstract) (PDF)
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| Design of a Digital Library for Early 20th Century Medico-legal Documents |
Thoma GR, Mao S, Misra D, Rees J
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| Proc. ECDL 2006. Eds: Gonzalo J et al. Berlin: Springer-Verlag; LNCS 4172: 147-57. |
| (Abstract) (PDF)
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| Digital Tools for Collecting Data from Cervigrams for Research and Training in Colposcopy |
Jeronimo J, Long R, Neve L, Bopf M, Antani K, Schiffman M
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| Journal of Lower Genital Tract Disease, 2006, 10(1):16-25. |
| (Abstract) (PDF)
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| dTagger: A POS Tagger |
Divita G, Browne AC, Loanne R
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| AMIA 2006 Symposium Proceedings pp 201-203 |
| (Abstract) (PDF)
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| Enhancing Biomedical Ontologies through Alignment of Semantic Relationships: Exploratory Approaches |
Bodenreider O, Peters L, McCray A
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| Proc AMIA Symp 2006:804-808 |
| (Abstract) (PDF)
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| Experience in Reasoning with the Foundational Model of Anatomy in OWL DL |
Zhang S, Bodenreider O, Golbreich C
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| In: Altman RB, Dunker AK, Hunter L, Murray TA, Klein TE, editors. Pacific Symposium on Biocomputing 2006: World Scientific; 2006. p. 200-211. |
| (Abstract) (PDF)
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| Exploiting Semantic Relations for Literature-Based Discovery |
Hristovski D, Friedman C, Rindflesch TC
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| AMIA Annu Symp Proc. 2006; 349-53 |
| (Abstract) (PDF)
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| Exploring and Developing Consumer Health Vocabularies |
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| Journal of the American Medical Informatics Association. 2006 Jan/Feb;(1)24-9. |
| (Abstract) (PDF)
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| Exploring User Navigation during Online Health Information Seeking |
Graham L, Tse T, Keselman A
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| Proc. AMIA 2006 |
| (Abstract) (PDF)
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| Finding Relevant Passages in Scientific Articles: Fusion of Automatic Approaches vs. an Interactive Team Effort |
Demner-Fushman D, Humphrey SM, Ide NC, Loane RF, Ruch P, Ruiz ME, Smith LH, Tanabe LK, Wilbur WJ, Aronson AR
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| Proc TREC 2006, 569-76 |
| (Abstract) (PDF)
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| Generative Content Models for Structural Analysis of Medical Abstracts |
Lin J, Karakos D, Demner-Fushman D, Khudanpur S
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| Proceedings of the 2006 Workshop on Biomedical Natural Language Processing (BioNLP'06), June 2006, New York City, New York |
| (Abstract) (PDF)
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| Genetics Home Reference: Helping Patients Understand the Role of Genetics in Health and Disease |
Fomous C, Mitchell JA, McCray A
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| Community Genet 2006;9:274-278 |
| (Abstract) (PDF)
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| Global Similarity and Local Divergence in Human and Mouse Gene Co-expression Networks |
Tsaparas P, Marino-Ramirez L, Bodenreider O
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| BMC Evol Biol 2006;6(1):70 |
| (Abstract) (PDF)
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| Historical Author Affiliations Assist Verification of Automatically Generated MEDLINE Citations |
Sabir TF, Hauser SE, Thoma GR
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| Proc AMIA 2006 |
| (Abstract) (PDF)
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| Information Rx: Evaluation of a New Informatics Tool for Physicians, Patients, and Libraries |
Siegel ER, Logan RA, Harnsberger RL, Cravedi K, Krause JA, Lyon B, Hajarian K, Uhl J, Ruffin A, Lindberg DA
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| Information Services and Use. 2006: 16(1): 1-10 |
| (Abstract) (PDF)
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| Interactive Publications: Creation and Usage |
Thoma GR, Ford G, Chung M, Vasudevan K, Antani S
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| Proc. IS and T/SPIE Electronic Imaging 2006: Digital Publishing. San Jose, CA. Jan 15-19, 2006. |
| (Abstract) (PDF)
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| Interpretation of Data and Identification of Information are Sine Qua Non for Modern Digital Information Services |
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| Proceedings of AMIA Symposium, 2006 |
| (Abstract) (PDF)
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| Law and Order: Assessing and Enforcing Compliance with Ontological Modeling Principles in the Foundational Model of Anatomy |
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| Computers in Biology and Medicine 2006; 36(6-7):674-693 |
| (Abstract) (PDF)
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| Lexical, Terminological and Ontological Resources for Biological Text Mining |
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| Ananiadou S, McNaught J, editors. Text mining for biology and biomedicine: Artech House; 2006. p. 43-66. |
| (Abstract) (PDF)
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| Mapping Data Elements to Terminological Resources for Integrating Biomedical Data Sourcse |
Mougin F, Burgun A, Bodenreider O
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| BMC Bioinformatics 2006;7(Suppl 3):S6 |
| (Abstract) (PDF)
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| Medical Validation and CBIR of Spine X-ray Images over the Internet |
Antani S, Cheng J, Long J, Long LR, Thoma GR
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| Proc. ISandT/SPIE Electronic Imaging Science and Technology 2006: Internet Imaging VII. San Jose. CA Jan 15-19, 2006, SPIE Vol. 6061 pp. 60610J (1-9). |
| (Abstract) (PDF)
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| MEDLINE as a Source of Just-in-Time Answers to Clinical Questions |
Demner-Fushman D, Hauser SE, Humphrey SM, Ford GM, Jacobs JL, Thoma GR
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| Proceeding of the 2006 Annual Symposium of the American Medical Informatics Association (AMIA 2006) |
| (Abstract) (PDF)
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| NLM Anatomical Ontology Alignment system: Results of the 2006 ontology alignment contest |
|
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| Proceedings of the Ontology Alignment Evaluation Initiative 2006 Campaign (OAEI 2006) 2006:145-156 |
| (Abstract) (PDF)
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| Performance, Instruction, and Technology in Health Care |
|
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| In: Reiser R, Dempsey J, editors. Trends and Issues in Instructional Design and Technology. New Jersey: Merrill/Prentice-Hall:2006. p. 197-208 |
| (Abstract) (PDF)
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|
| PICO as a Knowledge Representation for Clinical Questions |
Huang X, Lin J, Demner-Fushman D
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| Proceeding of the 2006 Annual Symposium of the American Medical Informatics Association (AMIA 2006) |
| (Abstract) (PDF)
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|
| Predictive Integration of Gene Ontology-Driven Similarity and Functional Interactions |
Azuaje F, Wang H, Zheng H, Bodenreider O, Chesneau A
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| In: Proceedings of IEEE International Conference on Data Mining (ICDM) 2006, Workshop on Data Mining in Bioinformatics: IEEE Computer Society Press; 2006. p. 114 - 119 |
| (Abstract) (PDF)
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|
| Pre-Indexing for Fast Partial Shape Matching of Vertebrae Images |
Xu X, Lee DJ, Antani S, Long RL
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| Proc. 19th International Symposium on Computer-Based Medical Systems (CBMS 2006), June 2006, Salt Lake City, Utah; 105-10 |
| (Abstract) (PDF)
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|
| Preliminary Comparison of Three Search Engines for Point of Care Access to MEDLINE Citations |
Hauser SE, Demner-Fushman D, Ford GM, Jacobs JL, Thoma GR
|
| Proceeding of the 2006 Annual Symposium of the American Medical Informatics Association (AMIA 2006) |
| (Abstract) (PDF)
|
|
| Preparing Digitized Cervigrams for Colposcopy Research and Education: Determination of Optimal Resolution and Compression Parameters |
Jeronimo J, Long R, Neve L, Ferris D, Noller K, Spitzer M, Mitra S, Guo J, Nutter B, Castle P, Herrero R, Rodriguez AC, Schiffman M
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| Journal of Lower Genital Tract Disease, Jan 2006, 10(1):39-44. |
| (Abstract) (PDF)
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| PubMed Interact: an Interactive Search Application for MEDLINE/PubMed |
Muin M, Fontelo P, Ackerman MJ
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| Proc. AMIA 2006, American Medical Informatics Association, Bethesda, MD, pg. 1039, 2006 |
| (Abstract) (PDF)
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| RxNav: A Web Service for Standard Drug Information |
Zeng K, Bodenreider O, Kilbourne J, Nelson SJ
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| Proc AMIA Symp 2006:1198 |
| (Abstract) (PDF)
|
|
| Semantic Processing to Enhance Retrieval of Diagnosis Citations from Medline |
Sneiderman, C, Demner-Fushman D, Fiszman M, Rosemblat G, Lang FM, Norwood D, Rindflesch TC
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| Proceeding of the 2006 Annual Symposium of the American Medical Informatics Association (AMIA 2006) |
| (Abstract) (PDF)
|
|
| Semantic Representation of Consumer Questions and Physician Answers |
Slaughter LA, Soergel D, Rindflesch TC
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| Int J Med Inform. 2006;75(7):513-29 |
| (Abstract) (PDF)
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| Situated Question Answering in the Clinical Domain: Selecting the Best Drug Treatment for Diseases |
|
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| Proceedings of COLING/ACL 2006 Workshop on Task-Focused Summarization and Question Answering, July 2006, Sydney, Australia |
| (Abstract) (PDF)
|
|
| SMS (Short Message Service) for Medline/Pubmed Access at the Point-of Care |
Fontelo P, Liu F, Ackerman MJ
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| Telemed. and e-Health, 12(2):237, 2006 |
| (Abstract) (PDF)
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|
| Summarizing Drug Information in Medline Citations |
Fiszman M, Rindflesch TC, Kilicoglu H
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| AMIA Annu Symp Proc. 2006; 254-8 |
| (Abstract) (PDF)
|
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| Surviving Change: The First Step Toward Sustaining Your Digital Library |
|
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| J. Trant and D. Bearman (eds.). Museums and the Web 2006: Proceedings, Toronto: Archives and Museum Informatics, published 2006 Mar. |
| (Abstract) (PDF)
|
|
| Technical Development of PubMed Interact: an Improved Interface for MEDLINE/PubMed Searches |
|
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| BMC Med Inform Decis Mak. 2006 Nov 3;6:36 |
| (Abstract) (PDF)
|
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| Technology for Medical Education, Research, and Disease Screening by Exploitation of Biomarkers in a Large Collection of Uterine Cervix Images |
Long RL, Antani S, Jeronimo J, Schiffman M, Bopf M, Neve L, Cornwall C, Budihas SC, Thoma GR
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| Proc. 19th International Symposium on Computer-Based Medical Systems (CBMS 2006), June 2006, Salt Lake City, Utah; 826-31 |
| (Abstract) (PDF)
|
|
| Text Features and Readability: Expert Evaluation of Consumer Health Text |
Rosemblat G, Logan R, Tse T, Graham L
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| Mednet 2006: 11th World Congress on Internet in Medicine the Society for Internet in Medicine. October 14-16, 2006. Toronto, Canada. |
| (Abstract) (PDF)
|
|
| The Effect of User Factors on Consumer Familiarity with Health Terms: Using Gender as a Proxy for Background Knowledge about Gender-Specific Illnesses |
Keselman A, Massengale L, Ngo L, Browne A, Zeng Q
|
| ISBMDA 2006: 472-481 |
| (Abstract) (PDF)
|
|
| The Foundational Model of Anatomy in OWL: Experience and Perspectives |
Golbreich C, Zhang S, Bodenreider O
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| Journal of Web Semantics: Science, Services and Agents on the World Wide Web 2006;4(3):181-195. |
| (Abstract) (PDF)
|
|
| The Role of Knowledge in Conceptual Retrieval: A Study in the Domain of Clinical Medicine |
|
|
| Proceedings of the 29th Annual International ACM SIGIR Conference on Research and Development in Information Retrieval (SIGIR 2006), pages 99-106, August 2006, Seattle, Washington |
| (Abstract) (PDF)
|
|
| The Role of the National Library of Medicine Web Sites in Newborn Screening Education |
|
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| Ment Retard Dev Disabil Res Rev. 2006;12(4):305-12 |
| (Abstract) (PDF)
|
|
| Txt2MEDLINE: Text-Messaging Access to MEDLINE/PubMed |
Fontelo P, Liu F, Muin M, Tolentino H, Ackerman MJ
|
| Proc.AMIA Annu Symp Proc. 2006;:259-63. |
| (Abstract) (PDF)
|
|
| User Study of a Spanish-language ClinicalTrials.gov Prototype System |
|
|
| To appear in Proceedings of the American Medical Informatics Association Annual Conference (AMIA 2006), Washington, DC, November 2006 pp 659-664. |
| (Abstract) (PDF)
|
|
| Using Dependence Relations in MeSH as a Framework for the Analysis of Disease Information in Medline |
|
|
| Proceddings of the Second International Symposium on Semantic Mining in Biomedicine (SMBM-2006) 2006:76-83 |
| (Abstract) (PDF)
|
|
| Using UMLS Metathesaurus Concepts to Describe Medical Images: Dermatology Vocabulary |
Woods JW, Sneiderman CA, Hameed K, Ackerman MJ, Hatton C
|
| Comput Biol Med. 2006 Jan;36(1):89-100. |
| (Abstract) (PDF)
|
|
| Using WordNet to Improve the Mapping of Data Elements to UMLS for Data Sources Integration |
Mougin F, Burgun A, Bodenreider O
|
| Proc AMIA Symp 2006:574-578. |
| (Abstract) (PDF)
|
|
| Word Sense Disambiguation by Selecting the Best Semantic Type Based on Journal Descriptor Indexing: Preliminary Experiment |
Humphrey SM, Rogers WJ, Kilicoglu H, Demner-Fushman D, Rindflesch TC
|
| Journal of the American Society for Information Science and Technology. 2006 Jan 1;57(1):96-113. |
| (Abstract) (PDF)
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