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Semantic Knowledge Representation Project

Publications

Rindflesch, Thomas C., and Alan R. Aronson. 1993. Semantic processing in information retrieval. Charles Safran (ed.) Proceedings of the 17th Annual Symposium on Computer Applications in Medical Care, 611-15.

Aronson, Alan R.; Thomas C. Rindflesch; and Allen C. Browne. 1994. Exploiting a large thesaurus for information retrieval. Proceedings of RIAO, 197-216.

Rindflesch, Thomas C., and Alan R. Aronson. 1994. Ambiguity resolution while mapping free text to the UMLS Metathesaurus. Judy G. Ozbolt (ed.) Proceedings of the 18th Annual Symposium on Computer Applications in Medical Care, 240-4.

Rindflesch, Thomas C. 1995. Integrating natural language processing and biomedical domain knowledge for increased information retrieval effectiveness. Proceedings of the 5th Annual Dual-use Technologies and Applications Conference, 260-5.

Aronson, Alan R. 1996. The effect of textual varation on concept based information retrieval. In Cimino JJ (ed.) Proceedings of the AMIA Annual Fall Symposium, 373-7.

Rindflesch, Thomas. C. 1996. Natural language processing. Annual Review of Applied Linguistics 16, 71-85.

Sneiderman Charles A.; Thomas C. Rindflesch; and Alan R. Aronson.  1996. Finding the Findings: Identification of Findings in Medical Literature Using Restricted Natural Language Processing. In Cimino JJ (ed.) Proceedings of the AMIA Annual Fall Symposium, 239-43.

Aronson, Alan R., and Thomas C. Rindflesch. 1997. Query expansion using the UMLS Metathesaurus. Daniel R. Masys (ed.) Proceedings of the AMIA Annual Fall Symposium, 485-89.

Sneiderman, Charles A.; Thomas C. Rindflesch; and Carol A. Bean. 1998.  Identification of anatomical terminology in medical text. Proceedings of the AMIA Annual Fall Symposium, 428-32.

Wright, Lawrence W.;  Holly K. Grossetta Nardini; Alan R. Aronson; and Thomas C. Rindflesch. 1999. Hierarchical concept indexing of full-text documents in the UMLS Information Sources Map.  Journal of the American Society for Information Science. 50(6):514-23.

Rindflesch, Thomas C.; Lawrence Hunter; and Alan R. Aronson. 1999. Mining molecular binding terms from biomedical text. Proceedings of the  AMIA Fall Symposium, 127-31.

Rindflesch, Thomas C.; Lorraine Tanabe; John W. Weinstein; and Lawrence Hunter. 2000. EDGAR: Extraction of drugs, genes and relations from the biomedical literature. Pacific Symposium on Biocomputing 5:514-25.

Rindflesch, Thomas C.; Jayant Rajan; and Lawrence Hunter. 2000. Extracting molecular binding relationships from biomedical text.Proceedings of the 6th Applied Natural Language Processing Conference, 188-95. Association for Computational Linguistics.

Rindflesch, Thomas C.; Carol A. Bean; and Charles A. Sneiderman. 2000. Argument identification for arterial branching predications asserted in cardiac catheterization reports. Proceedings of the  AMIA Fall Symposium.

Srinivasan, Padmini, and Thomas C. Rindflesch. 2002. Exploring text mining from MEDLINE. Isaac Kohane (ed.) Proceedings of the AMIA Annual Symposium, 722-6.

Srinivasan, Suresh; Thomas C. Rindflesch; William T. Hole; and Alan R. Aronson. 2002. Finding UMLS Metathesaurus concepts in MEDLINE. Isaac Kohane (ed.) Proceedings of the AMIA Annual Symposium, 727-31.

Rindflesch, Thomas C., and Alan R. Aronson. 2002. Semantic processing for enhanced access to biomedical knowledge. Vipul Kashyap and Leon Shklar (eds.) Real World Semantic Web Applications, 157-72. IOS Press.

Tringali, Michele; Marcelo Fiszman; Thomas Rindflesch; and Olivier Bodenreider. 2003. Medical Informatics, Europe. [abstract]

Rindflesch, Thomas C., and Marcelo Fiszman. 2003. The interaction of domain knowledge and linguistic structure in natural language processing: Interpreting hypernymic propositions in biomedical text. Journal of Biomedical Informatics [submitted].

Fiszman, Marcelo; Thomas C. Rindflesch; and Halil Kilicoglu. 2003. Integrating a hypernymic proposition interpreter into a semantic processor for biomedical text. Proceedings of the AMIA Annual Symposium.

Fiszman, Marcelo; Thomas C. Rindflesch; and Halil Kilicoglu. 2003. Interpreting hypernymic propositions in an online medical encyclopedia. Proceedings of the AMIA Annual Symposium. [abstract]

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